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1700120B22Rik Gene Detail
Summary
  • Symbol
    1700120B22Rik
  • Name
    RIKEN cDNA 1700120B22 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3604190
    NCBI Gene: 641387
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:63243068-63244153 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 32.56 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3604190
lncRNA gene Chr10:63242231-63244153 (-)
129S1/SvImJ MGP_129S1SvImJ_G0002862
antisense lncRNA gene Chr10:62754406-62755491 (-)
A/J MGP_AJ_G0002839
antisense lncRNA gene Chr10:60791757-60792842 (-)
AKR/J MGP_AKRJ_G0002819
antisense lncRNA gene Chr10:62400518-62401603 (-)
BALB/cJ MGP_BALBcJ_G0002826
antisense lncRNA gene Chr10:60904814-60905899 (-)
C3H/HeJ MGP_C3HHeJ_G0002783
antisense lncRNA gene Chr10:62319049-62320134 (-)
C57BL/6NJ MGP_C57BL6NJ_G0002969
antisense lncRNA gene Chr10:65007030-65008115 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002512
antisense lncRNA gene Chr10:57722449-57723557 (-)
CAST/EiJ MGP_CASTEiJ_G0002755
antisense lncRNA gene Chr10:62381865-62382940 (-)
CBA/J MGP_CBAJ_G0002778
antisense lncRNA gene Chr10:67480375-67481460 (-)
DBA/2J MGP_DBA2J_G0002785
antisense lncRNA gene Chr10:60062370-60063455 (-)
FVB/NJ MGP_FVBNJ_G0002805
antisense lncRNA gene Chr10:59336321-59337406 (-)
LP/J MGP_LPJ_G0002861
antisense lncRNA gene Chr10:63159469-63160549 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0002795
antisense lncRNA gene Chr10:69622878-69623963 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002972
antisense lncRNA gene Chr10:62240926-62242011 (-)
PWK/PhJ MGP_PWKPhJ_G0002713
antisense lncRNA gene Chr10:59949653-59950777 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002663
antisense lncRNA gene Chr10:61583492-61584577 (-)
WSB/EiJ MGP_WSBEiJ_G0002784
antisense lncRNA gene Chr10:62196325-62197396 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 1700120B22Rik
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045391 Ensembl Gene Model | MGI Sequence Detail 1086 C57BL/6J ±  kb
transcript ENSMUST00000054837 Ensembl | MGI Sequence Detail 464 Not Applicable  
polypeptide Q9CR85 UniProt | EBI | MGI Sequence Detail 126 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 4
    Genomic 1
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 17
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
07/29/2020
MGI 6.15
The Jackson Laboratory