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Zmynd15
Gene Detail
Symbol

Name
ID
Zmynd15
zinc finger, MYND-type containing 15
MGI:3603821
Feature Type
protein coding gene
Genetic Map
Chromosome 11
42.99 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr11:70459433-70466202 bp, + strand
From VEGA annotation of GRCm38

  6770 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12995  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: Zmynd15

Human
homologs
Human Homolog ZMYND15, zinc finger, MYND-type containing 15
NCBI Gene ID 84225
neXtProt AC  NX_Q9H091
Human Synonyms  SPGF14
Human Chr (Location)  17p13.2; chr17:4740015-4746119 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human ZMYND15
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(1) Targeted(2)
Genomic Mutations involving Zmynd15 (1)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a knock-out allele of Cxcl16 and Zmynd15 exhibit abnormal spermiogenesis and reduced male fertility.
 
Phenotype Images(4)
Interactions
Zmynd15 interacts with 20 markers (Mir1a-1, Mir1a-2, Mir7-2, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (43)    Tissues (29)    Images (13)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 43
cDNA source data(15)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(15) cDNA(15)
Microarray probesets(1)
Other database
links
VEGA Gene ModelOTTMUSG00000006043 (Evidence)
Ensembl Gene ModelENSMUSG00000040829 (Evidence)
Entrez Gene574428 (Evidence)
UniGene472771
DFCITC1585606, TC1592202
NIA Mouse Gene IndexU012851
Consensus CDS ProjectCCDS24949.1
International Mouse Knockout Project StatusZmynd15
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000006043 VEGA Gene Model | MGI Sequence Detail 6770 C57BL/6J ±  kb
transcript OTTMUST00000013605 VEGA | MGI Sequence Detail 2804 Not Applicable 
polypeptide OTTMUSP00000006310 VEGA | MGI Sequence Detail 736 Not Applicable 

For the selected sequences
All sequences(72) RefSeq(34) UniProt(5)
Polymorphisms
SNPs within 2kb(36 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002893 Zinc finger, MYND-type
Protein Ontology PR:000030687 zinc finger MYND domain-containing protein 15
References
(Earliest) J:123851 Aslanian AM, et al., Targeted disruption of the scavenger receptor and chemokine CXCL16 accelerates atherosclerosis. Circulation. 2006 Aug 8;114(6):583-90
(Latest) J:166802 Yan W, et al., Zmynd15 encodes a histone deacetylase-dependent transcriptional repressor essential for spermiogenesis and male fertility. J Biol Chem. 2010 Oct 8;285(41):31418-26
All references(22)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory