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Gpat3 Gene Detail
Summary
  • Symbol
    Gpat3
  • Name
    glycerol-3-phosphate acyltransferase 3
  • Synonyms
    4933407I02Rik, A230097K15Rik, Agpat9
  • Feature Type
    protein coding gene
  • IDs
    MGI:3603816
    NCBI Gene: 231510
  • Gene Overview
    MyGene.info: GPAT3
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:100845713-100899102 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 48.52 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    548 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3603816
protein coding gene Chr5:100845710-100899102 (.)
129S1/SvImJ MGP_129S1SvImJ_G0029794
protein coding gene Chr5:102360562-102416156 (+)
A/J MGP_AJ_G0029760
protein coding gene Chr5:98543382-98597173 (+)
AKR/J MGP_AKRJ_G0029706
protein coding gene Chr5:101782871-101840931 (+)
BALB/cJ MGP_BALBcJ_G0029770
protein coding gene Chr5:99571770-99624563 (+)
C3H/HeJ MGP_C3HHeJ_G0029493
protein coding gene Chr5:102131095-102185107 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030225
protein coding gene Chr5:106617486-106679558 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027460
protein coding gene Chr5:93786894-93838613 (+)
CAST/EiJ MGP_CASTEiJ_G0028904
protein coding gene Chr5:100797028-100861059 (+)
CBA/J MGP_CBAJ_G0029463
protein coding gene Chr5:110313411-110366785 (+)
DBA/2J MGP_DBA2J_G0029607
protein coding gene Chr5:98736699-98789276 (+)
FVB/NJ MGP_FVBNJ_G0029566
protein coding gene Chr5:97534700-97586885 (+)
LP/J MGP_LPJ_G0029695
protein coding gene Chr5:102972413-103025054 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029595
protein coding gene Chr5:115370702-115426916 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030258
protein coding gene Chr5:101271028-101323333 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0028457
protein coding gene Chr5:98940838-98995408 (+)
WSB/EiJ MGP_WSBEiJ_G0028982
protein coding gene Chr5:101606087-101672060 (+)



Homology
more
  • Human Ortholog
    GPAT3, glycerol-3-phosphate acyltransferase 3
  • Vertebrate Orthologs
    8
  • Human Ortholog
    GPAT3, glycerol-3-phosphate acyltransferase 3
    Orthology source: HGNC, HomoloGene
  • Synonyms
    AGPAT10, AGPAT 10, AGPAT8, AGPAT9, HMFN0839, LPAAT-theta, MAG1
  • Links
    NCBI Gene ID: 84803
    neXtProt AC: NX_Q53EU6
    UniProt: Q53EU6

  • Chr Location
    4q21.23; chr4:83535634-83605875 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    18 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Under high-fat feeding, mice homozygous for a knock-out allele exhibit increased energy expenditure, improved glucose homeostasis, enlarged livers, increased total serum cholesterol levels, altered liver cholesterol metabolism, and female-specific protection from diet-induced obesity.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000029314 Ensembl Gene Model | MGI Sequence Detail 53390 C57BL/6J ±  kb
    transcript ENSMUST00000031255 Ensembl | MGI Sequence Detail 2884 Not Applicable  
    polypeptide ENSMUSP00000031255 Ensembl | MGI Sequence Detail 438 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 10
      Genomic 2
      cDNA 8

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:1918298
    References
    more
    • Summaries
      All 36
      Developmental Gene Expression 1
      Gene Ontology 5
      Phenotypes 11
    • Earliest
      J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
    • Latest
      J:242338 Pagac M, et al., SEIPIN Regulates Lipid Droplet Expansion and Adipocyte Development by Modulating the Activity of Glycerol-3-phosphate Acyltransferase. Cell Rep. 2016 Nov 01;17(6):1546-1559

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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    Funding Information
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    last database update
    12/04/2018
    MGI 6.13
    The Jackson Laboratory