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Agpat9
Gene Detail
Symbol

Name
ID
Agpat9
1-acylglycerol-3-phosphate O-acyltransferase 9
MGI:3603816
Synonyms
4933407I02Rik, A230097K15Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 5
48.52 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:100845713-100899102 bp, + strand
From VEGA annotation of GRCm38

  53390 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:13099  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

HCOP human homology predictions: AGPAT9
Gene Tree: Agpat9

Human
homologs
AGPAT9, 1-acylglycerol-3-phosphate O-acyltransferase 9
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 84803
neXtProt AC: NX_Q53EU6

Human Synonyms: AGPAT 10, AGPAT8, GPAT3, HMFN0839, LPAAT-theta, MAG1

Human Chr (Location): 4q21.23; chr4:83535914-83605875 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(4) Targeted(1)
Incidental mutations (data from APF )
Interactions
Agpat9 interacts with 173 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(8)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase LOC100485787 ; ZFIN agpat9    NEW 
Molecular
reagents
All nucleic(9) Genomic(1) cDNA(8)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000026133 (Evidence)
Ensembl Gene Model ENSMUSG00000029314 (Evidence)
Entrez Gene 231510 (Evidence)
DFCI TC1579401
DoTS DT.40184617, DT.55219360, DT.103562686, DT.94291407, DT.94291408
EC 2.3.1.51, 2.3.1.15
Consensus CDS Project CCDS19470.1
International Mouse Phenotyping Consortium Status Agpat9
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026133 VEGA Gene Model | MGI Sequence Detail 53390 C57BL/6J ±  kb
transcript OTTMUST00000064542 VEGA | MGI Sequence Detail 3059 Not Applicable 
polypeptide OTTMUSP00000032074 VEGA | MGI Sequence Detail 438 Not Applicable 

For the selected sequences
All sequences(52) RefSeq(8) UniProt(2)
Polymorphisms
SNPs within 2kb(561 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002123 Phospholipid/glycerol acyltransferase
Protein Ontology PR:000003841 glycerol-3-phosphate acyltransferase 3
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:213618 Cao J, et al., Mice deleted for GPAT3 have reduced GPAT activity in white adipose tissue and altered energy and cholesterol homeostasis in diet-induced obesity. Am J Physiol Endocrinol Metab. 2014 May 15;306(10):E1176-87
All references(29)
Other
accession IDs
MGI:1918298

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory