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Agpat9
Gene Detail
 Symbol
Name
ID
Agpat9
1-acylglycerol-3-phosphate O-acyltransferase 9
MGI:3603816
Synonyms 4933407I02Rik, A230097K15Rik
Feature Type protein coding gene
Genetic Map
Chromosome 5
48.52 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:100845713-100899102 bp, + strand
From VEGA annotation of GRCm38

  53390 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:13099  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

Gene Tree: Agpat9

Human
homologs
Human Homolog AGPAT9, 1-acylglycerol-3-phosphate O-acyltransferase 9
NCBI Gene ID 84803
neXtProt AC  NX_Q53EU6
Human Synonyms  AGPAT 10, AGPAT8, GPAT3, LPAAT-theta, MAG1
Human Chr (Location)  4q21.23; chr4:83535733-83605875 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(4)
Incidental mutations (data from APF )
Interactions
Agpat9 interacts with 174 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (17 annotations)
Process lipid metabolic process, metabolic process, ...
Component endoplasmic reticulum, endoplasmic reticulum membrane, ...
Function 1-acylglycerol-3-phosphate O-acyltransferase activity, glycerol-3-phosphate O-acyltransferase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)   
Theiler Stages: 22
Assay TypeResults
RNA in situ 94
cDNA source data(8)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(9) Genomic(1) cDNA(8)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000026133 (Evidence)
Ensembl Gene ModelENSMUSG00000029314 (Evidence)
Entrez Gene231510 (Evidence)
DFCITC1579401
DoTSDT.103562686, DT.40184617, DT.55219360, DT.94291407, DT.94291408
EC2.3.1.15, 2.3.1.51
Consensus CDS ProjectCCDS19470.1
International Mouse Knockout Project StatusAgpat9
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026133 VEGA Gene Model | MGI Sequence Detail 53390 C57BL/6J ±  kb
transcript OTTMUST00000064542 VEGA | MGI Sequence Detail 3059 Not Applicable 
polypeptide OTTMUSP00000032074 VEGA | MGI Sequence Detail 438 Not Applicable 

For the selected sequences
All sequences(46) RefSeq(2) UniProt(2)
Polymorphisms SNPs within 2kb(561 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002123 Phospholipid/glycerol acyltransferase
Protein Ontology PR:000003841 glycerol-3-phosphate acyltransferase 3
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(30)
Other
accession IDs
MGI:1918298

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory