About   Help   FAQ
Ubtfl1 Gene Detail
Summary
  • Symbol
    Ubtfl1
  • Name
    upstream binding transcription factor, RNA polymerase I-like 1
  • Synonyms
    B020006M18Rik, Hmgpi
  • Feature Type
    protein coding gene
  • IDs
    MGI:3588290
    NCBI Gene: 546118
Location & Maps
more
  • Sequence Map
    Chr9:18404418-18411502 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      7085 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 7.04 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    UBTFL1, upstream binding transcription factor, RNA polymerase I-like 1
  • Vertebrate Orthologs
    8
  • Human Ortholog
    UBTFL1, upstream binding transcription factor, RNA polymerase I-like 1
    Orthology source: HGNC
  • Synonyms
    C11orf27, HMGPI
  • Links
    NCBI Gene ID: 642623
    neXtProt AC: NX_P0CB47

  • Chr Location
    11q14.3; chr11:90085950-90087131 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000036484 VEGA Gene Model | MGI Sequence Detail 7085 C57BL/6J ±  kb
transcript OTTMUST00000093513 VEGA | MGI Sequence Detail 2639 Not Applicable  
polypeptide OTTMUSP00000051888 VEGA | MGI Sequence Detail 394 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    22 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000033503 upstream-binding factor 1-like protein 1
  • InterPro Domains
    IPR009071 High mobility group box domain
Molecular
Reagents
less
  • All nucleic 16
    cDNA 14
    Primer pair 2

    Microarray probesets 2
References
more
  • Summaries
    All 19
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:155582 Yamada M, et al., Involvement of a novel preimplantation-specific gene encoding the high mobility group box protein Hmgpi in early embryonic development. Hum Mol Genet. 2010 Feb 1;19(3):480-93

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/19/2016
MGI 6.04
The Jackson Laboratory