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I830077J02Rik
Gene Detail
Symbol

Name
ID
I830077J02Rik
RIKEN cDNA I830077J02 gene
MGI:3588284
Feature Type
protein coding gene
Genetic Map
Chromosome 3
46.45 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr3:105925891-105932664 bp, - strand
From VEGA annotation of GRCm38

  6774 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:45482  Vertebrate Homology Class
1 human; 1 mouse; 2 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: I830077J02Rik

Human
homologs
Human Homolog C1orf162, chromosome 1 open reading frame 162
NCBI Gene ID 128346
neXtProt AC  NX_Q8NEQ5
Human Chr (Location)  1p13.2; chr1:111473867-111478512 (+)  GRCh38
Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
I830077J02Rik interacts with 69 markers (Mir7-1, Mir28b, Mir28c, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component integral component of membrane, membrane
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(8)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(8) cDNA(8)
Microarray probesets(1)
Other database
links
VEGA Gene ModelOTTMUSG00000026612 (Evidence)
Ensembl Gene ModelENSMUSG00000074342 (Evidence)
Entrez Gene433638 (Evidence)
UniGene239081
DFCITC1589866
DoTSDT.40148793
NIA Mouse Gene IndexU053033
Consensus CDS ProjectCCDS17713.1
International Mouse Knockout Project StatusI830077J02Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026612 VEGA Gene Model | MGI Sequence Detail 6774 C57BL/6J ±  kb
transcript OTTMUST00000065852 VEGA | MGI Sequence Detail 1066 Not Applicable 
polypeptide OTTMUSP00000032877 VEGA | MGI Sequence Detail 132 Not Applicable 

For the selected sequences
All sequences(22) RefSeq(6) UniProt(1)
Polymorphisms
SNPs within 2kb(98 from dbSNP Build 137)
References
(Earliest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(19)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory