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Spata31d1c Gene Detail
Summary
  • Symbol
    Spata31d1c
  • Name
    spermatogenesis associated 31 subfamily D, member 1C
  • Synonyms
    4932441B19Rik, Fam75d1c
  • Feature Type
    protein coding gene
  • IDs
    MGI:3588241
    NCBI Gene: 238683
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:65033058-65038004 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 34.21 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    75 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3588241
protein coding gene Chr13:65033058-65038004 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020683
protein coding gene Chr13:65044277-65049197 (+)
A/J MGP_AJ_G0020637
protein coding gene Chr13:62675371-62680291 (+)
AKR/J MGP_AKRJ_G0020614
protein coding gene Chr13:64745202-64750122 (+)
BALB/cJ MGP_BALBcJ_G0020635
protein coding gene Chr13:63106768-63111682 (+)
C3H/HeJ MGP_C3HHeJ_G0020430
protein coding gene Chr13:64276911-64281919 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021071
protein coding gene Chr13:67170148-67175084 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018647
protein coding gene Chr13:60339095-60344091 (+)
CAST/EiJ MGP_CASTEiJ_G0019947
protein coding gene Chr13:64321481-64326755 (+)
CBA/J MGP_CBAJ_G0020390
protein coding gene Chr13:69729762-69734744 (+)
DBA/2J MGP_DBA2J_G0020515
protein coding gene Chr13:62517869-62522832 (+)
FVB/NJ MGP_FVBNJ_G0020494
protein coding gene Chr13:61594947-61599879 (+)
LP/J MGP_LPJ_G0020589
protein coding gene Chr13:65328329-65333259 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020523
protein coding gene Chr13:68658201-68663174 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021113
protein coding gene Chr13:64072088-64077076 (+)
PWK/PhJ MGP_PWKPhJ_G0019701
protein coding gene Chr13:62079640-62084720 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019527
protein coding gene Chr13:62256293-62261243 (+)
WSB/EiJ MGP_WSBEiJ_G0020007
protein coding gene Chr13:64537943-64542859 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 238683 NCBI Gene Model | MGI Sequence Detail 4947 C57BL/6J ±  kb
transcript NM_001083890 RefSeq | MGI Sequence Detail 3390 C57BL/6  
polypeptide NP_001077359 RefSeq | MGI Sequence Detail 853 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR027970 Domain of unknown function DUF4599
    IPR039509 SPATA31/FAM205
Molecular
Reagents
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  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 21
    Phenotypes 7
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/22/2020
MGI 6.16
The Jackson Laboratory