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Ccdc160 Gene Detail
Summary
  • Symbol
    Ccdc160
  • Name
    coiled-coil domain containing 160
  • Synonyms
    6330534C20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3588225
    NCBI Gene: 434778
Location & Maps
more
  • Sequence Map
    ChrX:52791200-52799468 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      8269 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome X, 29.19 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    CCDC160, coiled-coil domain containing 160
  • Vertebrate Orthologs
    8
  • Human Ortholog
    CCDC160, coiled-coil domain containing 160
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 347475
    neXtProt AC: NX_A6NGH7

  • Chr Location
    Xq26.2; chrX:134237047-134246207 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    8 phenotypes from 1 allele in 1 genetic background
    17 images
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    55
  • Gene trapped
    52
  • Targeted
    3
  • Incidental Mutations
Male chimeras hemizygous for a gene trapped allele exhibit abnormal rostral-caudal axis patterning, failure of chorioallantoic fusion, incomplete cephalic closure, kinked and open neural tubes, delayed heart looping and, in some cases, a distended pericardium.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017349 VEGA Gene Model | MGI Sequence Detail 8269 C57BL/6J ±  kb
transcript OTTMUST00000042132 VEGA | MGI Sequence Detail 1536 Not Applicable  
polypeptide OTTMUSP00000018939 VEGA | MGI Sequence Detail 323 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    8 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 27
    Phenotypes 11
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory