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Gabrr3 Gene Detail
Summary
  • Symbol
    Gabrr3
  • Name
    gamma-aminobutyric acid (GABA) receptor, rho 3
  • Feature Type
    protein coding gene
  • IDs
    MGI:3588203
    NCBI Gene: 328699
  • Gene Overview
    MyGene.info: GABRR3
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr16:59407382-59461739 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 34.83 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    780 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3588203
protein coding gene Chr16:59407332-59464504 (.)
129S1/SvImJ MGP_129S1SvImJ_G0022929
protein coding gene Chr16:58684001-58740634 (+)
A/J MGP_AJ_G0022897
protein coding gene Chr16:56206646-56261157 (+)
AKR/J MGP_AKRJ_G0022867
protein coding gene Chr16:57921922-57978151 (+)
BALB/cJ MGP_BALBcJ_G0022899
protein coding gene Chr16:56340436-56394260 (+)
C3H/HeJ MGP_C3HHeJ_G0022661
protein coding gene Chr16:58160981-58218592 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023347
protein coding gene Chr16:60302872-60376934 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020850
protein coding gene Chr16:55647708-55700125 (+)
CAST/EiJ MGP_CASTEiJ_G0022185
protein coding gene Chr16:58433811-58492491 (+)
CBA/J MGP_CBAJ_G0022632
protein coding gene Chr16:62757251-62816045 (+)
DBA/2J MGP_DBA2J_G0022764
protein coding gene Chr16:55904945-55956529 (+)
FVB/NJ MGP_FVBNJ_G0022738
protein coding gene Chr16:55613018-55667797 (+)
LP/J MGP_LPJ_G0022833
protein coding gene Chr16:58485304-58547831 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022757
protein coding gene Chr16:63139182-63198207 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023363
protein coding gene Chr16:58032255-58089162 (+)
PWK/PhJ MGP_PWKPhJ_G0021927
protein coding gene Chr16:56128725-56183448 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021757
protein coding gene Chr16:57763498-57821332 (+)
WSB/EiJ MGP_WSBEiJ_G0022231
protein coding gene Chr16:58064512-58122794 (+)



Homology
more
  • Human Ortholog
    GABRR3, gamma-aminobutyric acid type A receptor rho3 subunit (gene/pseudogene)
  • Vertebrate Orthologs
    10
  • Human Ortholog
    GABRR3, gamma-aminobutyric acid type A receptor rho3 subunit (gene/pseudogene)
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 200959
    neXtProt AC: NX_A8MPY1
    UniProt: A8MPY1

  • Chr Location
    3q11.2; chr3:97986683-98035304 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 328699 NCBI Gene Model | MGI Sequence Detail 54358 C57BL/6J ±  kb
transcript NM_001081190 RefSeq | MGI Sequence Detail 1456 Not Specified  
polypeptide NP_001074659 RefSeq | MGI Sequence Detail 464 Not Specified  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR006028 Gamma-aminobutyric acid A receptor/Glycine receptor alpha
    IPR006201 Neurotransmitter-gated ion-channel
    IPR018000 Neurotransmitter-gated ion-channel, conserved site
    IPR006202 Neurotransmitter-gated ion-channel ligand-binding domain
    IPR036734 Neurotransmitter-gated ion-channel ligand-binding domain superfamily
    IPR006029 Neurotransmitter-gated ion-channel transmembrane domain
    IPR036719 Neurotransmitter-gated ion-channel transmembrane domain superfamily
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 1
References
more
  • Summaries
    All 22
    Developmental Gene Expression 3
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:185665 Guo Z, et al., Tlx1/3 and ptf1a control the expression of distinct sets of transmitter and Peptide receptor genes in the developing dorsal spinal cord. J Neurosci. 2012 Jun 20;32(25):8509-20

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory