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Cdh19 Gene Detail
Summary
  • Symbol
    Cdh19
  • Name
    cadherin 19, type 2
  • Feature Type
    protein coding gene
  • IDs
    MGI:3588198
    NCBI Gene: 227485
Location & Maps
more
  • Sequence Map
    Chr1:110888326-110977584 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      89259 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 50.78 cM
  • Detailed Genetic Map ± 1 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    CDH19, cadherin 19
  • Vertebrate Orthologs
    8
  • Human Ortholog
    CDH19, cadherin 19
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CDH7, CDH7L2
  • Links
    NCBI Gene ID: 28513
    neXtProt AC: NX_Q9H159

  • Chr Location
    18q22.1; chr18:66501187-66604138 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    7
  • Chemically induced (other)
    2
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    3 involving Cdh19
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000048849 VEGA Gene Model | MGI Sequence Detail 89259 C57BL/6J ±  kb
transcript OTTMUST00000124945 VEGA | MGI Sequence Detail 3914 Not Applicable  
polypeptide OTTMUSP00000067869 VEGA | MGI Sequence Detail 770 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    465 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 7
    Primer pair 1

    Microarray probesets 1
References
more
  • Summaries
    All 20
    Developmental Gene Expression 2
    Phenotypes 10
  • Earliest
    J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
  • Latest
    J:186285 Lefkovics K, et al., Comparative analysis of type II classic cadherin mRNA distribution patterns in the developing and adult mouse somatosensory cortex and hippocampus suggests significant functional redundancy. J Comp Neurol. 2012 May 1;520(7):1387-1405

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/24/2016
MGI 6.04
The Jackson Laboratory