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3425401B19Rik Gene Detail
Summary
  • Symbol
    3425401B19Rik
  • Name
    RIKEN cDNA 3425401B19 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:3588196
    NCBI Gene: 100504518
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:32659119-32685293 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 19.40 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    451 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3588196
protein coding gene Chr14:32659118-32707825 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021149
protein coding gene Chr14:25917701-25951284 (-)
A/J MGP_AJ_G0021097
protein coding gene Chr14:24928607-24955386 (-)
AKR/J MGP_AKRJ_G0021074
protein coding gene Chr14:26084437-26110899 (-)
BALB/cJ MGP_BALBcJ_G0021101
protein coding gene Chr14:25110325-25136229 (-)
C3H/HeJ MGP_C3HHeJ_G0020884
protein coding gene Chr14:25960232-25986972 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021533
protein coding gene Chr14:26942714-26971506 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019095
protein coding gene Chr14:24994940-25022525 (-)
CAST/EiJ MGP_CASTEiJ_G0020409
protein coding gene Chr14:25769932-25797904 (-)
CBA/J MGP_CBAJ_G0020851
protein coding gene Chr14:27950333-27981399 (-)
DBA/2J MGP_DBA2J_G0020973
protein coding gene Chr14:24954208-24980220 (-)
FVB/NJ MGP_FVBNJ_G0020957
protein coding gene Chr14:24921005-24947144 (-)
LP/J MGP_LPJ_G0021042
protein coding gene Chr14:26236096-26264761 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020983
protein coding gene Chr14:27152932-27179718 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021566
protein coding gene Chr14:25876972-25902751 (-)
PWK/PhJ MGP_PWKPhJ_G0020157
protein coding gene Chr14:24444608-24469988 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019981
protein coding gene Chr14:25497016-25523812 (-)
WSB/EiJ MGP_WSBEiJ_G0020464
protein coding gene Chr14:25936781-25964793 (-)



Homology
more
  • Human Ortholog
    C10orf71, chromosome 10 open reading frame 71
  • Vertebrate Orthologs
    8
  • Human Ortholog
    C10orf71, chromosome 10 open reading frame 71
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CEFIP
  • Links
    NCBI Gene ID: 118461
    neXtProt AC: NX_Q711Q0
    UniProt: Q711Q0

  • Chr Location
    10q11.23; chr10:49297009-49330145 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000071540 Ensembl Gene Model | MGI Sequence Detail 26175 C57BL/6J ±  kb
transcript ENSMUST00000096038 Ensembl | MGI Sequence Detail 5547 Not Applicable  
polypeptide ENSMUSP00000093741 Ensembl | MGI Sequence Detail 1412 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR027838 Domain of unknown function DUF4585
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 3
References
more
  • Summaries
    All 19
    Gene Ontology 3
    Phenotypes 1
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:245587 Dierck F, et al., The novel cardiac z-disc protein CEFIP regulates cardiomyocyte hypertrophy by modulating calcineurin signaling. J Biol Chem. 2017 Sep 15;292(37):15180-15191

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory