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Atxn7l1 Gene Detail
Summary
  • Symbol
    Atxn7l1
  • Name
    ataxin 7-like 1
  • Synonyms
    2810423G08Rik, Atxn7l4
  • Feature Type
    protein coding gene
  • IDs
    MGI:3584458
    NCBI Gene: 380753
  • Alliance
  • Transcription Start Sites
    14 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:33147693-33373185 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 14.03 cM, cytoband B2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1224 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3584458
protein coding gene Chr12:33147598-33376408 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019674
protein coding gene Chr12:31212523-31438294 (+)
A/J MGP_AJ_G0019641
protein coding gene Chr12:30274734-30503461 (+)
AKR/J MGP_AKRJ_G0019612
protein coding gene Chr12:31264435-31491758 (+)
BALB/cJ MGP_BALBcJ_G0019618
protein coding gene Chr12:30500444-30722937 (+)
C3H/HeJ MGP_C3HHeJ_G0019422
protein coding gene Chr12:31115042-31345079 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020065
protein coding gene Chr12:32132457-32377420 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017690
protein coding gene Chr12:29562973-29784506 (+)
CAST/EiJ MGP_CASTEiJ_G0018977
protein coding gene Chr12:26157399-26401075 (+)
CBA/J MGP_CBAJ_G0019394
protein coding gene Chr12:33172689-33416453 (+)
DBA/2J MGP_DBA2J_G0019507
protein coding gene Chr12:30094076-30321035 (+)
FVB/NJ MGP_FVBNJ_G0019498
protein coding gene Chr12:29882081-30112967 (+)
LP/J MGP_LPJ_G0019577
protein coding gene Chr12:31284726-31515658 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019533
protein coding gene Chr12:32799416-33033524 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020105
protein coding gene Chr12:30764856-30992491 (+)
PWK/PhJ MGP_PWKPhJ_G0018744
protein coding gene Chr12:24868413-25096229 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018532
protein coding gene Chr12:25390793-25633896 (+)
WSB/EiJ MGP_WSBEiJ_G0019027
protein coding gene Chr12:31010684-31239192 (+)



Homology
more
  • Human Ortholog
    ATXN7L1, ataxin 7 like 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ATXN7L1, ataxin 7 like 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ATXN7L4
  • Links
    NCBI Gene ID: 222255
    neXtProt AC: NX_Q9ULK2
    UniProt: Q9ULK2

  • Chr Location
    7q22.3; chr7:105604774-105877232 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020564 Ensembl Gene Model | MGI Sequence Detail 225493 C57BL/6J ±  kb
transcript ENSMUST00000146040 Ensembl | MGI Sequence Detail 2973 Not Applicable  
polypeptide ENSMUSP00000122156 Ensembl | MGI Sequence Detail 927 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    Genomic 1
    cDNA 12

    Microarray probesets 6
Other
Accession IDs
less
MGI:1919424
References
more
  • Summaries
    All 24
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory