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Aknad1 Gene Detail
Summary
  • Symbol
    Aknad1
  • Name
    AKNA domain containing 1
  • Synonyms
    4921525H12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3584453
    NCBI Gene: 329738
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:108739658-108782309 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 47.64 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    306 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3584453
protein coding gene Chr3:108739560-108782309 (.)
129S1/SvImJ MGP_129S1SvImJ_G0027785
protein coding gene Chr3:110312408-110363534 (+)
A/J MGP_AJ_G0027745
protein coding gene Chr3:106812646-106856078 (+)
AKR/J MGP_AKRJ_G0027710
protein coding gene Chr3:109408976-109455626 (+)
BALB/cJ MGP_BALBcJ_G0027757
protein coding gene Chr3:106511673-106556097 (+)
C3H/HeJ MGP_C3HHeJ_G0027487
protein coding gene Chr3:109765749-109811677 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028201
protein coding gene Chr3:114406655-114452073 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025539
protein coding gene Chr3:102940736-102983400 (+)
CAST/EiJ MGP_CASTEiJ_G0026943
protein coding gene Chr3:109155580-109206710 (+)
CBA/J MGP_CBAJ_G0027462
protein coding gene Chr3:118320075-118369227 (+)
DBA/2J MGP_DBA2J_G0027604
protein coding gene Chr3:105983231-106028257 (+)
FVB/NJ MGP_FVBNJ_G0027572
protein coding gene Chr3:103872724-103914173 (+)
LP/J MGP_LPJ_G0027711
protein coding gene Chr3:111725625-111780885 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027602
protein coding gene Chr3:124359766-124411782 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028256
protein coding gene Chr3:109005595-109054331 (+)
PWK/PhJ MGP_PWKPhJ_G0026669
protein coding gene Chr3:105738662-105783336 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026489
protein coding gene Chr3:107155011-107197785 (+)
WSB/EiJ MGP_WSBEiJ_G0027023
protein coding gene Chr3:109545945-109591083 (+)



Homology
more
  • Human Ortholog
    AKNAD1, AKNA domain containing 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    AKNAD1, AKNA domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C1orf62
  • Links
    NCBI Gene ID: 254268
    neXtProt AC: NX_Q5T1N1
    UniProt: Q5T1N1

  • Chr Location
    1p13.3; chr1:108815898-108858242 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000049565 Ensembl Gene Model | MGI Sequence Detail 42652 C57BL/6J ±  kb
transcript ENSMUST00000133931 Ensembl | MGI Sequence Detail 2603 Not Applicable  
polypeptide ENSMUSP00000121755 Ensembl | MGI Sequence Detail 675 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR022150 Transcription factor, AT-hook-containing
Molecular
Reagents
less
  • All nucleic 7
    Genomic 2
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 19
    Diseases 1
    Phenotypes 5
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory