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Aknad1 Gene Detail
Summary
  • Symbol
    Aknad1
  • Name
    AKNA domain containing 1
  • Synonyms
    4921525H12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3584453
    NCBI Gene: 329738
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:108739658-108782309 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 47.64 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    306 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3584453
protein coding gene Chr3:108739559-108782309 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027785
protein coding gene Chr3:110312408-110363534 (+)
A/J MGP_AJ_G0027745
protein coding gene Chr3:106812646-106856078 (+)
AKR/J MGP_AKRJ_G0027710
protein coding gene Chr3:109408976-109455626 (+)
BALB/cJ MGP_BALBcJ_G0027757
protein coding gene Chr3:106511673-106556097 (+)
C3H/HeJ MGP_C3HHeJ_G0027487
protein coding gene Chr3:109765749-109811677 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028201
protein coding gene Chr3:114406655-114452073 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025539
protein coding gene Chr3:102940736-102983400 (+)
CAST/EiJ MGP_CASTEiJ_G0026943
protein coding gene Chr3:109155580-109206710 (+)
CBA/J MGP_CBAJ_G0027462
protein coding gene Chr3:118320075-118369227 (+)
DBA/2J MGP_DBA2J_G0027604
protein coding gene Chr3:105983231-106028257 (+)
FVB/NJ MGP_FVBNJ_G0027572
protein coding gene Chr3:103872724-103914173 (+)
LP/J MGP_LPJ_G0027711
protein coding gene Chr3:111725625-111780885 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027602
protein coding gene Chr3:124359766-124411782 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028256
protein coding gene Chr3:109005595-109054331 (+)
PWK/PhJ MGP_PWKPhJ_G0026669
protein coding gene Chr3:105738662-105783336 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026489
protein coding gene Chr3:107155011-107197785 (+)
WSB/EiJ MGP_WSBEiJ_G0027023
protein coding gene Chr3:109545945-109591083 (+)



Homology
more
  • Human Ortholog
    AKNAD1, AKNA domain containing 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    AKNAD1, AKNA domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C1orf62
  • Links
    NCBI Gene ID: 254268
    neXtProt AC: NX_Q5T1N1
    UniProt: Q5T1N1

  • Chr Location
    1p13.3; chr1:108815898-108858242 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000049565 Ensembl Gene Model | MGI Sequence Detail 42652 C57BL/6J ±  kb
transcript ENSMUST00000133931 Ensembl | MGI Sequence Detail 2603 Not Applicable  
polypeptide ENSMUSP00000121755 Ensembl | MGI Sequence Detail 675 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR022150 Transcription factor, AT-hook-containing
Molecular
Reagents
less
  • All nucleic 7
    Genomic 2
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 19
    Diseases 1
    Phenotypes 5
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/30/2020
MGI 6.15
The Jackson Laboratory