Gvin3 Gene Detail

Summary

• Symbol
  Gvin3
• Name
  GTPase, very large interferon inducible, family member 3
• Synonyms
  Gm1966

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:3584360
  NCBI Gene: 434223
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:106195950-106203242 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 56.01 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  336 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3584360	protein coding gene	Chr7:106194756-106243853 (-)
129S1/SvImJ	ENSMUSG00200034110	pseudogene	Chr7:92742728-92750231 (-)
A/J	ENSMUSG00195054724	pseudogene	Chr7:97245357-97252860 (-)
AKR/J	ENSMUSG00220051952	pseudogene	Chr7:90622591-90630094 (-)
BALB/cJ	ENSMUSG00180044741	pseudogene	Chr7:93924821-93932324 (-)
C3H/HeJ	ENSMUSG00175052542	pseudogene	Chr7:94567945-94575448 (-)
C57BL/6NJ	ENSMUSG00215051701	pseudogene	Chr7:93839101-93846393 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053133	pseudogene	Chr7:97185061-97192341 (-)
CBA/J	ENSMUSG00210048131	pseudogene	Chr7:94393432-94400934 (-)
DBA/2J	ENSMUSG00185057061	pseudogene	Chr7:98745864-98753367 (-)
FVB/NJ	ENSMUSG00205048043	pseudogene	Chr7:94307295-94314587 (-)
JF1/MsJ	ENSUMUG00000049645	pseudogene	Chr7:103714458-103721750 (-)
LP/J	ENSMUSG00230048936	pseudogene	Chr7:104847401-104854904 (-)
NOD/ShiLtJ	ENSMUSG00190048148	pseudogene	Chr7:94517788-94525080 (-)
NZO/HlLtJ	ENSMUSG00225019390	pseudogene	Chr7:103064414-103071918 (-)
PWK/PhJ	ENSLUMG00010041454	pseudogene	Chr7:92906994-92914285 (-)
SPRET/EiJ	ENSMSPG00010042269	pseudogene	Chr7:93986096-93993387 (-)
WSB/EiJ	ENSIUOG00005049934	pseudogene	Chr7:95136880-95144172 (-)

Homology

• Gene Tree
  Gvin3
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gvin3
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  44 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  54
• RefSeq
  25
• UniProt
  3

• Ensembl
  ENSMUSG00000073902 (Evidence)
• NCBI Gene
  434223

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000073902	Ensembl Gene Model | MGI Sequence Detail	7293	C57BL/6J
transcript	ENSMUST00000184540	Ensembl | MGI Sequence Detail	7293	Not Applicable
polypeptide	NP_001264110	RefSeq | MGI Sequence Detail	2430	C57BL/6

Protein
Information

• UniProt
  3 Sequences
• InterPro Domains
  IPR059914 Interferon-induced very large GTPase 1, N-terminal domain
  IPR063107 Interferon-induced very large GTPase 1, second domain
  IPR060180 Up-regulator of cell proliferation-like, N-terminal

Molecular
Reagents

• All nucleic 4

  cDNA 4

  
  

  Microarray probesets 1

Other
Accession IDs

MGI:6441883

References

• Summaries
  All 22

  Phenotypes 9
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67