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Gm1965 Gene Detail
Summary
  • Symbol
    Gm1965
  • Name
    predicted gene 1965
Location &
Maps
more
  • Sequence Map
    Chr6:89140994-89147370 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 39.81 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    41 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3584270
lncRNA gene Chr6:89140994-89147388 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007014
lincRNA gene Chr6:90568753-90578943 (+)
A/J MGP_AJ_G0007010
lincRNA gene Chr6:87094454-87101574 (+)
AKR/J MGP_AKRJ_G0006978
lincRNA gene Chr6:89578230-89584628 (+)
BALB/cJ MGP_BALBcJ_G0006986
lincRNA gene Chr6:87076792-87084266 (+)
C3H/HeJ MGP_C3HHeJ_G0006939
lincRNA gene Chr6:94856485-94864318 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007150
lincRNA gene Chr6:92986693-92994664 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006385
lincRNA gene Chr6:85244742-85248948 (+)
CAST/EiJ MGP_CASTEiJ_G0006843
lincRNA gene Chr6:89696547-89702812 (+)
CBA/J MGP_CBAJ_G0006911
lincRNA gene Chr6:96513575-96519651 (+)
DBA/2J MGP_DBA2J_G0006931
lincRNA gene Chr6:86366486-86373115 (+)
FVB/NJ MGP_FVBNJ_G0006955
lincRNA gene Chr6:85565669-85572099 (+)
LP/J MGP_LPJ_G0007017
lincRNA gene Chr6:90596657-90606860 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006935
lincRNA gene Chr6:100651382-100663964 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007155
lincRNA gene Chr6:89444245-89451674 (+)
PWK/PhJ MGP_PWKPhJ_G0006782
lincRNA gene Chr6:85349865-85357203 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006692
lincRNA gene Chr6:88257301-88263675 (+)
WSB/EiJ MGP_WSBEiJ_G0006900
lincRNA gene Chr6:89891431-89897842 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 434065 NCBI Gene Model | MGI Sequence Detail 6377 C57BL/6J ±  kb
transcript NR_121593 RefSeq | MGI Sequence Detail 2433 C57BL/6  
polypeptide Q3UTD5 UniProt | EBI | MGI Sequence Detail 142 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 5
Other
Accession IDs
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MGI:2141555, MGI:2141566, MGI:2141576, MGI:2141774
References
more
  • Summaries
    All 19
    Phenotypes 3
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:241559 Ackert-Bicknell CL, et al., A chromosomal inversion within a quantitative trait locus has a major effect on adipogenesis and osteoblastogenesis. Ann N Y Acad Sci. 2007 Nov;1116:291-305

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/10/2020
MGI 6.16
The Jackson Laboratory