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Gm1965 Gene Detail
Summary
  • Symbol
    Gm1965
  • Name
    predicted gene 1965
  • Feature Type
    lincRNA gene
  • IDs
    MGI:3584270
    NCBI Gene: 434065
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:89140994-89147370 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 39.81 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    41 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3584270
lincRNA gene Chr6:89140994-89147388 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007014
lincRNA gene Chr6:90568753-90578943 (+)
A/J MGP_AJ_G0007010
lincRNA gene Chr6:87094454-87101574 (+)
AKR/J MGP_AKRJ_G0006978
lincRNA gene Chr6:89578230-89584628 (+)
BALB/cJ MGP_BALBcJ_G0006986
lincRNA gene Chr6:87076792-87084266 (+)
C3H/HeJ MGP_C3HHeJ_G0006939
lincRNA gene Chr6:94856485-94864318 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007150
lincRNA gene Chr6:92986693-92994664 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006385
lincRNA gene Chr6:85244742-85248948 (+)
CAST/EiJ MGP_CASTEiJ_G0006843
lincRNA gene Chr6:89696547-89702812 (+)
CBA/J MGP_CBAJ_G0006911
lincRNA gene Chr6:96513575-96519651 (+)
DBA/2J MGP_DBA2J_G0006931
lincRNA gene Chr6:86366486-86373115 (+)
FVB/NJ MGP_FVBNJ_G0006955
lincRNA gene Chr6:85565669-85572099 (+)
LP/J MGP_LPJ_G0007017
lincRNA gene Chr6:90596657-90606860 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006935
lincRNA gene Chr6:100651382-100663964 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007155
lincRNA gene Chr6:89444245-89451674 (+)
PWK/PhJ MGP_PWKPhJ_G0006782
lincRNA gene Chr6:85349865-85357203 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006692
lincRNA gene Chr6:88257301-88263675 (+)
WSB/EiJ MGP_WSBEiJ_G0006900
lincRNA gene Chr6:89891431-89897842 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 434065 NCBI Gene Model | MGI Sequence Detail 6377 C57BL/6J ±  kb
transcript NR_121593 RefSeq | MGI Sequence Detail 2433 C57BL/6  
polypeptide Q3UTD5 UniProt | EBI | MGI Sequence Detail 142 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 5
Other
Accession IDs
less
MGI:2141555, MGI:2141566, MGI:2141576, MGI:2141774
References
more
  • Summaries
    All 18
    Phenotypes 2
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:105810 Akeson EC, et al., Chromosomal inversion discovered in C3H/HeJ mice. Genomics. 2006 Feb;87(2):311-3

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/18/2019
MGI 6.14
The Jackson Laboratory