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D030056L22Rik Gene Detail
Summary
  • Symbol
    D030056L22Rik
  • Name
    RIKEN cDNA D030056L22 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:3583960
    NCBI Gene: 225995
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:18690599-18695793 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 13.20 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    22 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3583960
protein coding gene Chr19:18690557-18695793 (+)
129S1/SvImJ MGP_129S1SvImJ_G0024969
protein coding gene Chr19:16597958-16604034 (+)
A/J MGP_AJ_G0024946
protein coding gene Chr19:15661179-15667576 (+)
AKR/J MGP_AKRJ_G0024916
protein coding gene Chr19:16285713-16290944 (+)
BALB/cJ MGP_BALBcJ_G0024945
protein coding gene Chr19:15694369-15699589 (+)
C3H/HeJ MGP_C3HHeJ_G0024703
protein coding gene Chr19:16225763-16230957 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025387
protein coding gene Chr19:17190164-17195399 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022806
protein coding gene Chr19:16030967-16036180 (+)
CAST/EiJ MGP_CASTEiJ_G0024171
protein coding gene Chr19:15866155-15871384 (+)
CBA/J MGP_CBAJ_G0024681
protein coding gene Chr19:17812542-17817755 (+)
DBA/2J MGP_DBA2J_G0024813
protein coding gene Chr19:15691619-15696839 (+)
FVB/NJ MGP_FVBNJ_G0024774
protein coding gene Chr19:15606716-15612185 (+)
LP/J MGP_LPJ_G0024897
protein coding gene Chr19:16566075-16571301 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024801
protein coding gene Chr19:17690030-17702415 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025442
protein coding gene Chr19:16225706-16232198 (+)
PWK/PhJ MGP_PWKPhJ_G0023920
protein coding gene Chr19:15238346-15243670 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023725
protein coding gene Chr19:15510651-15515747 (+)
WSB/EiJ MGP_WSBEiJ_G0024239
protein coding gene Chr19:16268471-16273697 (+)



Homology
more
  • Human Ortholog
    C9orf40, chromosome 9 open reading frame 40
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C9orf40, chromosome 9 open reading frame 40
  • Links
    NCBI Gene ID: 55071
    neXtProt AC: NX_Q8IXQ3
    UniProt: Q8IXQ3

  • Chr Location
    9q21.13; chr9:74946583-74952886 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotype references
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 225995 NCBI Gene Model | MGI Sequence Detail 5195 C57BL/6J ±  kb
transcript NM_001374130 RefSeq | MGI Sequence Detail 1636 C57BL/6  
polypeptide Q8VCE4 UniProt | EBI | MGI Sequence Detail 163 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    3 Sequences
  • InterPro Domains
    IPR033461 Putative WW-binding domain and destruction box
    IPR042349 Uncharacterized protein C9orf40-like
Molecular
Reagents
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  • All nucleic 34
    cDNA 34

    Microarray probesets 3
References
more
  • Summaries
    All 19
    Phenotypes 3
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/07/2021
MGI 6.17
The Jackson Laboratory