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Wdr72
Gene Detail
Symbol

Name
ID
Wdr72
WD repeat domain 72
MGI:3583957
Feature Type
protein coding gene
Genetic Map
Chromosome 9
41.06 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr9:74110331-74283308 bp, + strand
From VEGA annotation of GRCm38

  172978 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:52326  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

HCOP human homology predictions: WDR72
Gene Tree: Wdr72

Human
homologs
WDR72, WD repeat domain 72
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 256764
neXtProt AC: NX_Q3MJ13

Human Synonyms: AI2A3

Human Chr (Location): 15q21.3; chr15:53513741-53762878 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human WDR72

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Wdr72 interacts with 247 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cytoplasm
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(12)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase wdr72    NEW 
Molecular
reagents
All nucleic(12) cDNA(12)
Microarray probesets(2)
Other database
links
VEGA Gene Model OTTMUSG00000023578 (Evidence)
Ensembl Gene Model ENSMUSG00000044976 (Evidence)
Entrez Gene 546144 (Evidence)
UniGene 335289
DFCI TC1594705, TC1708489, TC1644359
DoTS DT.91435266, DT.94255224, DT.40182740, DT.94153042
NIA Mouse Gene Index U328127, U043004
Consensus CDS Project CCDS23338.2
International Mouse Phenotyping Consortium Status Wdr72
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023578 VEGA Gene Model | MGI Sequence Detail 172978 C57BL/6J ±  kb
transcript OTTMUST00000057548 VEGA | MGI Sequence Detail 5196 Not Applicable 
polypeptide OTTMUSP00000027763 VEGA | MGI Sequence Detail 1114 Not Applicable 

For the selected sequences
All sequences(51) RefSeq(13) UniProt(4)
Polymorphisms
SNPs within 2kb(1401 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011044 Quinoprotein amine dehydrogenase, beta chain-like
InterPro IPR001680 WD40 repeat
InterPro IPR019775 WD40 repeat, conserved site
InterPro IPR017986 WD40-repeat-containing domain
InterPro IPR015943 WD40/YVTN repeat-like-containing domain
Protein Ontology PR:000029867 WD repeat-containing protein 72
References
(Earliest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(26)
Other
accession IDs
MGI:2143335

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory