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Khdc1c Gene Detail
Summary
  • Symbol
    Khdc1c
  • Name
    KH domain containing 1C
  • Feature Type
    protein coding gene
  • IDs
    MGI:3583007
    NCBI Gene: 433278
Location & Maps
more
  • Sequence Map
    Chr1:21368331-21370845 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      2515 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 6.62 cM, cytoband A4
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    KHDC1, KH homology domain containing 1
  • Vertebrate Orthologs
    8
  • Human Ortholog
    KHDC1, KH homology domain containing 1
    Orthology source: HGNC
  • Synonyms
    bA257K9.4, C6orf147, C6orf148, Em:AC019205.8, NDG1
  • Links
    NCBI Gene ID: 80759
    neXtProt AC: NX_Q4VXA5

  • Chr Location
    6q13; chr6:73241314-73310365 (-)  GRCh38.p2

  • Human Ortholog
    KHDC1L, KH domain containing 1 like
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 100129128
    neXtProt AC: NX_Q5JSQ8

  • Chr Location
    6q13; chr6:73223544-73225452 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033756 VEGA Gene Model | MGI Sequence Detail 2515 C57BL/6J ±  kb
transcript OTTMUST00000097914 VEGA | MGI Sequence Detail 1946 Not Applicable  
polypeptide OTTMUSP00000054925 VEGA | MGI Sequence Detail 166 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    66 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 15
    Gene Ontology 1
  • Earliest
    J:127161 Pierre A, et al., Atypical structure and phylogenomic evolution of the new eutherian oocyte- and embryo-expressed KHDC1/DPPA5/ECAT1/OOEP gene family. Genomics. 2007 Nov;90(5):583-94

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory