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AI847159 Gene Detail
Summary
  • Symbol
    AI847159
  • Name
    expressed sequence AI847159
  • Synonyms
    OTTMUSG00000015420
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3528181
    NCBI Gene: 100048701
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:129020068-129022593 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 62.75 cM
Strain
Comparison
more
  • SNPs within 2kb
    34 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3528181
 lncRNA gene Chr2:129000586-129022612 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003633
 antisense lncRNA gene Chr2:132533121-132555214 (-)
A/J MGP_AJ_G0003615
 antisense lncRNA gene Chr2:127164383-127186591 (-)
AKR/J MGP_AKRJ_G0003593
 antisense lncRNA gene Chr2:130772296-130799086 (-)
BALB/cJ MGP_BALBcJ_G0003604
 antisense lncRNA gene Chr2:127426434-127451104 (-)
C3H/HeJ MGP_C3HHeJ_G0003551
 antisense lncRNA gene Chr2:131285281-131309089 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003743
 antisense lncRNA gene Chr2:136681349-136704363 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003251
 antisense lncRNA gene Chr2:122006019-122008484 (-)
CAST/EiJ MGP_CASTEiJ_G0003514
 antisense lncRNA gene Chr2:131541498-131566736 (-)
CBA/J MGP_CBAJ_G0003548
 antisense lncRNA gene Chr2:141733688-141763026 (-)
DBA/2J MGP_DBA2J_G0003556
 antisense lncRNA gene Chr2:126553292-126576130 (-)
FVB/NJ MGP_FVBNJ_G0003576
 antisense lncRNA gene Chr2:125202538-125225635 (-)
LP/J MGP_LPJ_G0003633
 antisense lncRNA gene Chr2:132776661-132800489 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003564
 antisense lncRNA gene Chr2:145641368-145664161 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003744
 antisense lncRNA gene Chr2:130810197-130834557 (-)
PWK/PhJ MGP_PWKPhJ_G0003469
 antisense lncRNA gene Chr2:126157778-126160285 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003412
 antisense lncRNA gene Chr2:129921391-129949976 (-)
WSB/EiJ MGP_WSBEiJ_G0003548
 antisense lncRNA gene Chr2:131731710-131755235 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    9
  • Chemically induced (other)
    1
  • Gene trapped
    6
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving AI847159
  • Find Mice (IMSR)
    28 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    717
  • Tissues
    7
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100048701 NCBI Gene Model | MGI Sequence Detail 2526 C57BL/6J ±  kb
transcript NR_045264 RefSeq | MGI Sequence Detail 1022 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:3650449
References
more
  • Summaries
    All 15
    Developmental Gene Expression 1
    Phenotypes 7
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory