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Taar9 Gene Detail
Summary
  • Symbol
    Taar9
  • Name
    trace amine-associated receptor 9
  • Synonyms
    Ta3, Tar3, Trar3
  • Feature Type
    protein coding gene
  • IDs
    MGI:3527454
    NCBI Gene: 503558
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr10:23984386-23985432 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 11.44 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    32 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3527454
 protein coding gene Chr10:23984386-23985432 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017089
 protein coding gene Chr10:22059309-22060355 (-)
A/J MGP_AJ_G0017066
 protein coding gene Chr10:21414312-21415358 (-)
AKR/J MGP_AKRJ_G0017026
 protein coding gene Chr10:21764501-21765547 (-)
BALB/cJ MGP_BALBcJ_G0017029
 protein coding gene Chr10:21501120-21502166 (-)
C3H/HeJ MGP_C3HHeJ_G0016849
 protein coding gene Chr10:21979998-21981044 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017487
 protein coding gene Chr10:22750500-22751546 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015185
 protein coding gene Chr10:20130326-20131372 (-)
CAST/EiJ MGP_CASTEiJ_G0016428
 protein coding gene Chr10:21891663-21892709 (-)
CBA/J MGP_CBAJ_G0016823
 protein coding gene Chr10:23754108-23755154 (-)
DBA/2J MGP_DBA2J_G0016928
 protein coding gene Chr10:21149025-21150071 (-)
FVB/NJ MGP_FVBNJ_G0016923
 protein coding gene Chr10:20866740-20867786 (-)
LP/J MGP_LPJ_G0017005
 protein coding gene Chr10:22062180-22063226 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016953
 protein coding gene Chr10:23890108-23891154 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017523
 protein coding gene Chr10:21632000-21633046 (-)
PWK/PhJ MGP_PWKPhJ_G0016210
 protein coding gene Chr10:20926036-20927082 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015994
 protein coding gene Chr10:21438492-21439538 (-)
WSB/EiJ MGP_WSBEiJ_G0016491
 protein coding gene Chr10:21727847-21740893 (-)



Homology
more
  • Human Ortholog
    TAAR9, trace amine associated receptor 9
  • Vertebrate Orthologs
    64
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TAAR9, trace amine associated receptor 9
  • Synonyms
    TA3, TAR3, TAR9, TRAR3
  • Links
    NCBI Gene ID: 134860
    neXtProt AC: NX_Q96RI9
    UniProt: Q96RI9

  • Chr Location
    6q23.2; chr6:132538277-132539336 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    708
  • Tissues
    2
  • cDNA Data
    6
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 503558 NCBI Gene Model | MGI Sequence Detail 1047 C57BL/6J ±  kb
transcript NM_001010831 RefSeq | MGI Sequence Detail 1047 C57BL/6  
polypeptide Q5QD04 UniProt | EBI | MGI Sequence Detail 348 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 6
    Primer pair 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:2685077
References
more
  • Summaries
    All 33
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 12
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:322210 Fei A, et al., Coordination of two enhancers drives expression of olfactory trace amine-associated receptors. Nat Commun. 2021 Jun 18;12(1):3798
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory