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Taar9
Gene Detail
 Symbol
Name
ID
Taar9
trace amine-associated receptor 9
MGI:3527454
Synonyms Ta3, Tar3, Trar3
Feature Type protein coding gene
Genetic Map
Chromosome 10
11.44 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr10:24108488-24109534 bp, - strand
From VEGA annotation of GRCm38

  1047 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:65286  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 cattle

Protein SuperFamily: trace amine-associated receptor
Gene Tree: Taar9

Human
homologs
Human Homolog TAAR9, trace amine associated receptor 9 (gene/pseudogene)
NCBI Gene ID 134860
neXtProt AC  NX_Q96RI9
Human Synonyms  TA3, TAR3, TAR9, TRAR3
Human Chr (Location)  6q23.2; chr6:132538288-132539336 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(6) : Targeted(6)
Genomic Mutations involving Taar9 (2)
Incidental mutations (data from APF )
Interactions
Taar9 interacts with 19 markers (Mir19a, Mir137, Mir192, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process G-protein coupled receptor signaling pathway, signal transduction
Component integral component of membrane, membrane, ...
Function G-protein coupled amine receptor activity, G-protein coupled receptor activity, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (2)    Tissues (2)   
Theiler Stages: 28
Assay TypeResults
RT-PCR 2
cDNA source data(5)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(6) cDNA(5) Primer pair(1)
Microarray probesets(1)
Other database
links
VEGA Gene ModelOTTMUSG00000019224 (Evidence)
Ensembl Gene ModelENSMUSG00000037424 (Evidence)
Entrez Gene503558 (Evidence)
UniGene300923
DFCITC1750191
DoTSDT.103583967
Consensus CDS ProjectCCDS23748.1
International Mouse Knockout Project StatusTaar9
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000019224 VEGA Gene Model | MGI Sequence Detail 1047 C57BL/6J ±  kb
transcript OTTMUST00000046031 VEGA | MGI Sequence Detail 1047 Not Applicable 
polypeptide OTTMUSP00000020769 VEGA | MGI Sequence Detail 348 Not Applicable 

For the selected sequences
All sequences(17) RefSeq(2) UniProt(2)
Polymorphisms SNPs within 2kb(32 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR017452 GPCR, rhodopsin-like, 7TM
InterPro IPR000276 G protein-coupled receptor, rhodopsin-like
InterPro IPR009132 Trace amine receptor
Protein Ontology PR:000001718 trace amine-associated receptor 9
References (Earliest) J:83410 Vassilatis DK, et al., The G protein-coupled receptor repertoires of human and mouse. Proc Natl Acad Sci U S A. 2003 Apr 15;100(8):4903-8
(Latest) J:197678 Dewan A, et al., Non-redundant coding of aversive odours in the main olfactory pathway. Nature. 2013 May 23;497(7450):486-9
All references(28)
Other
accession IDs
MGI:2685077

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory