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Slfn10-ps Pseudogene Detail
Summary
  • Symbol
    Slfn10-ps
  • Name
    schlafen 10, pseudogene
Location &
Maps
more
  • Sequence Map
    Chr11:82919681-82926992 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 50.30 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    165 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3512288
 polymorphic pseudogene Chr11:82918949-82931359 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039794
 pseudogene Chr11:84349499-84366616 (-)
A/J MGP_AJ_G0039793
 pseudogene Chr11:81078779-81107584 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0039767
 pseudogene Chr11:81439708-81520872 (-)
C3H/HeJ MGP_C3HHeJ_G0039423
 pseudogene Chr11:83563210-83575152 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040330
 pseudogene Chr11:86795424-86881532 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0036948
 pseudogene Chr11:78009753-78021950 (-)
CAST/EiJ MGP_CASTEiJ_G0038538
 pseudogene Chr11:84185110-84199726 (-)
CBA/J MGP_CBAJ_G0039395
 pseudogene Chr11:90615296-90625702 (-)
DBA/2J MGP_DBA2J_G0039593
 pseudogene Chr11:80648937-80704339 (-)
FVB/NJ MGP_FVBNJ_G0039550
 pseudogene Chr11:80200276-80207321 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0039551
 pseudogene Chr11:90746500-90822236 (-)
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0038217
 pseudogene Chr11:81483347-81499220 (-)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000072621 Ensembl Gene Model | MGI Sequence Detail 7312 C57BL/6J ±  kb
transcript ENSMUST00000152760 Ensembl | MGI Sequence Detail 2673 Not Applicable  
polypeptide NP_001342442 RefSeq | MGI Sequence Detail 928 CAST/EiJ  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 15
    Phenotypes 3
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:152085 Bustos O, et al., Evolution of the Schlafen genes, a gene family associated with embryonic lethality, meiotic drive, immune processes and orthopoxvirus virulence. Gene. 2009 Nov 1;447(1):1-11
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory