Fcnc-ps Pseudogene Detail

Summary

• Symbol
  Fcnc-ps
• Name
  ficolin C pseudogene
• Synonyms
  H-Fcn

• Feature Type
  pseudogene
• IDs
  MGI:3510254
  NCBI Gene: 493918
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:132958856-132966597 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 66.25 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3510254	pseudogene	Chr4:132958856-132966597 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Fcnc-ps
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  6
• RefSeq
  1

• NCBI Gene
  493918

Representative Sequences			Length	Strain/Species
genomic	493918	NCBI Gene Model | MGI Sequence Detail	7742	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:93198 Endo Y, et al., Identification of the mouse H-ficolin gene as a pseudogene and orthology between mouse ficolins A/B and human L-/M-ficolins. Genomics. 2004 Oct;84(4):737-44