About   Help   FAQ
Rnase9
Gene Detail
Symbol

Name
ID
Rnase9
ribonuclease, RNase A family, 9 (non-active)
MGI:3057273
Feature Type
protein coding gene
Genetic Map
Chromosome 14
26.35 cM, cytoband B-C1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr14:51038459-51041869 bp, - strand
From Ensembl annotation of GRCm38

  3411 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:18830  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 2 rhesus macaque

HCOP human homology predictions: RNASE9
Protein SuperFamily: pyrimidine-specific ribonuclease/angiogenin
Gene Tree: Rnase9

Human
homologs
RNASE9, ribonuclease, RNase A family, 9 (non-active)
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 390443
neXtProt AC: NX_P60153

Human Synonyms: h461, HEL128, RAK1

Human Chr (Location): 14q11.2; chr14:20556093-20560931 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Targeted(5)
Interactions
Rnase9 interacts with 89 markers (Mir1b, Mir17, Mir20a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process positive regulation of sperm motility involved in capacitation
Component extracellular region
Function nucleic acid binding
External Resources: FuncBase
Expression
cDNA source data(2)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(2) cDNA(2)
Microarray probesets(1)
Other database
links
Ensembl Gene Model ENSMUSG00000052382 (Evidence)
Entrez Gene 328401 (Evidence)
UniGene 99528
DFCI TC1588413
DoTS DT.101722811
NIA Mouse Gene Index U035519
Consensus CDS Project CCDS36909.1
International Mouse Phenotyping Consortium Status Rnase9
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000052382 Ensembl Gene Model | MGI Sequence Detail 3411 C57BL/6J ±  kb
transcript ENSMUST00000064214 Ensembl | MGI Sequence Detail 1189 Not Applicable 
polypeptide ENSMUSP00000066637 Ensembl | MGI Sequence Detail 184 Not Applicable 

For the selected sequences
All sequences(20) RefSeq(4) UniProt(4)
Polymorphisms
SNPs within 2kb(62 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001427 Ribonuclease A
InterPro IPR023412 Ribonuclease A-domain
Protein Ontology PR:000014052 ribonuclease-like protein 9
References
(Earliest) J:93827 Penttinen J, et al., Discovery in silico and characterization in vitro of novel genes exclusively expressed in the mouse epididymis. Mol Endocrinol. 2003 Nov;17(11):2138-51
(Latest) J:212760 Westmuckett AD, et al., Impaired sperm maturation in RNASE9 knockout mice. Biol Reprod. 2014 Jun;90(6):120
All references(22)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/18/2015
MGI 6.0
The Jackson Laboratory