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Nlrp4b Gene Detail
Summary
  • Symbol
    Nlrp4b
  • Name
    NLR family, pyrin domain containing 4B
  • Synonyms
    Nalp4b, NALP9E, Nalp-gamma
  • Feature Type
    protein coding gene
  • IDs
    MGI:3056570
    NCBI Gene: 210045
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:10687793-10730168 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 6.58 cM, cytoband A1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    179 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3056570
protein coding gene Chr7:10687789-10730168 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031627
protein coding gene Chr7:7950749-8000530 (+)
A/J MGP_AJ_G0031603
protein coding gene Chr7:7797370-7837909 (+)
AKR/J MGP_AKRJ_G0031529
protein coding gene Chr7:8061421-8106477 (+)
BALB/cJ MGP_BALBcJ_G0031610
protein coding gene Chr7:7928047-7987390 (+)
C3H/HeJ MGP_C3HHeJ_G0031331
protein coding gene Chr7:7953483-7993752 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032074
protein coding gene Chr7:8392046-8429890 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0030691
protein coding gene Chr7:5926772-5974581 (+)
CBA/J MGP_CBAJ_G0031288
protein coding gene Chr7:8495916-8540333 (+)
DBA/2J MGP_DBA2J_G0031446
protein coding gene Chr7:7704354-7746643 (+)
FVB/NJ MGP_FVBNJ_G0031400
protein coding gene Chr7:7711130-7753670 (+)
LP/J MGP_LPJ_G0031532
protein coding gene Chr7:8017899-8065292 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031439
protein coding gene Chr7:8573997-8619341 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032102
protein coding gene Chr7:7829549-7883991 (+)
PWK/PhJ MGP_PWKPhJ_G0030418
protein coding gene Chr7:6322415-6361926 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030246
protein coding gene Chr7:4659313-4700869 (+)
WSB/EiJ MGP_WSBEiJ_G0030786
protein coding gene Chr7:7914024-7964775 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 210045 NCBI Gene Model | MGI Sequence Detail 42376 C57BL/6J ±  kb
transcript NM_001355151 RefSeq | MGI Sequence Detail 3294 C57BL/6  
polypeptide Q8C6J9 UniProt | EBI | MGI Sequence Detail 863 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 24
    cDNA 23
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:2142143
References
more
  • Summaries
    All 22
    Developmental Gene Expression 2
    Gene Ontology 1
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:125833 Joshi S, et al., Ovarian gene expression in the absence of FIGLA, an oocyte-specific transcription factor. BMC Dev Biol. 2007;7:67

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/18/2020
MGI 6.14
The Jackson Laboratory