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A630095E13Rik Gene Detail
Summary
  • Symbol
    A630095E13Rik
  • Name
    RIKEN cDNA A630095E13 gene
  • Synonyms
    LOC235973, Sslp-1
  • Feature Type
    protein coding gene
  • IDs
    MGI:3055869
    NCBI Gene: 235973
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:36635754-36638602 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 20.66 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    20 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3055869
protein coding gene Chr9:36635754-36643376 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034552
protein coding gene Chr9:34543306-34550923 (-)
A/J MGP_AJ_G0034531
protein coding gene Chr9:33658211-33666170 (-)
AKR/J MGP_AKRJ_G0034458
protein coding gene Chr9:34409753-34418783 (-)
BALB/cJ MGP_BALBcJ_G0034522
protein coding gene Chr9:33503925-33512778 (-)
C3H/HeJ MGP_C3HHeJ_G0034235
protein coding gene Chr9:34814956-34824261 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035044
protein coding gene Chr9:35674654-35685457 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0033556
protein coding gene Chr9:34513281-34520893 (-)
CBA/J MGP_CBAJ_G0034208
protein coding gene Chr9:36897808-36905483 (-)
DBA/2J MGP_DBA2J_G0034366
protein coding gene Chr9:33715884-33723318 (-)
FVB/NJ MGP_FVBNJ_G0034307
protein coding gene Chr9:32972752-32980968 (-)
LP/J MGP_LPJ_G0034451
protein coding gene Chr9:34809851-34817448 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034353
protein coding gene Chr9:38566052-38575808 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035063
protein coding gene Chr9:34337068-34346026 (-)
PWK/PhJ MGP_PWKPhJ_G0033262
protein coding gene Chr9:33616889-33624782 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033096
protein coding gene Chr9:34550933-34562621 (-)
WSB/EiJ MGP_WSBEiJ_G0033672
protein coding gene Chr9:34137386-34148913 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 235973 NCBI Gene Model | MGI Sequence Detail 2849 C57BL/6J ±  kb
transcript NM_001033325 RefSeq | MGI Sequence Detail 626 C57BL/6  
polypeptide Q3UN54 UniProt | EBI | MGI Sequence Detail 99 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 4
    cDNA 3
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:2685037
References
more
  • Summaries
    All 21
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:87858 Abbott DE, et al., Expressed sequence tag profiling identifies developmental and anatomic partitioning of gene expression in the mouse prostate. Genome Biol. 2003;4(12):R79
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory