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Nanog-ps2 Pseudogene Detail
Summary
  • Symbol
    Nanog-ps2
  • Name
    Nanog pseudogene 2
  • Synonyms
    nanogPb
  • Feature Type
    pseudogene
  • IDs
    MGI:3051570
    NCBI Gene: 446216
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr12:61505296-61505824 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 26.43 cM, cytoband C1
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    44 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3051570
 pseudogene Chr12:61505109-61505830 (+)
129S1/SvImJ MGP_129S1SvImJ_G0010912
 pseudogene Chr12:60791783-60792310 (+)
A/J MGP_AJ_G0010917
 pseudogene Chr12:58576375-58576902 (+)
AKR/J MGP_AKRJ_G0010872
 pseudogene Chr12:60404860-60405388 (+)
BALB/cJ MGP_BALBcJ_G0010893
 pseudogene Chr12:58966636-58967163 (+)
C3H/HeJ MGP_C3HHeJ_G0010789
 pseudogene Chr12:60614054-60614581 (+)
C57BL/6NJ MGP_C57BL6NJ_G0011164
 pseudogene Chr12:62599639-62600167 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0009774
 pseudogene Chr12:56720435-56721002 (+)
CAST/EiJ MGP_CASTEiJ_G0010620
 pseudogene Chr12:55429862-55430390 (+)
CBA/J MGP_CBAJ_G0010764
 pseudogene Chr12:64933776-64934303 (+)
DBA/2J MGP_DBA2J_G0010810
 pseudogene Chr12:58503579-58504107 (+)
FVB/NJ MGP_FVBNJ_G0010822
 pseudogene Chr12:57663414-57663941 (+)
LP/J MGP_LPJ_G0010895
 pseudogene Chr12:60837919-60838447 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0010803
 pseudogene Chr12:66849725-66850253 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0011148
 pseudogene Chr12:59821813-59822340 (+)
PWK/PhJ MGP_PWKPhJ_G0010510
 pseudogene Chr12:52759864-52760392 (+)
SPRET/EiJ MGP_SPRETEiJ_G0010323
 pseudogene Chr12:54211426-54211954 (+)
WSB/EiJ MGP_WSBEiJ_G0010667
 pseudogene Chr12:60380469-60380996 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000100476 Ensembl Gene Model | MGI Sequence Detail 529 C57BL/6J ±  kb
transcript ENSMUST00000190988 Ensembl | MGI Sequence Detail 529 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    Genomic 1
References
more
  • Summaries
    All 7
    Phenotypes 2
  • Earliest
    J:91586 Booth HA, et al., Eleven daughters of NANOG. Genomics. 2004 Aug;84(2):229-38
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory