About   Help   FAQ
Usp17lb Gene Detail
Summary
  • Symbol
    Usp17lb
  • Name
    ubiquitin specific peptidase 17-like B
  • Synonyms
    Dub1a
  • Feature Type
    protein coding gene
  • IDs
    MGI:3051498
    NCBI Gene: 381944
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:104840257-104842597 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 55.69 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    30 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3051498
protein coding gene Chr7:104840257-104842603 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0032632
protein coding gene Chr7:103829972-103831985 (+)
AKR/J MGP_AKRJ_G0032636
protein coding gene Chr7:107782764-107787123 (-)
BALB/cJ MGP_BALBcJ_G0032713
protein coding gene Chr7:104797498-104802826 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0033215
protein coding gene Chr7:112271760-112274091 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0030200
protein coding gene Chr7:107214487-107217641 (-)
CAST/EiJ MGP_CASTEiJ_G0031752
protein coding gene Chr7:99755315-99759221 (-)
CBA/J MGP_CBAJ_G0032392
protein coding gene Chr7:115927025-115930347 (-)
DBA/2J MGP_DBA2J_G0032546
protein coding gene Chr7:103507243-103515770 (+)
FVB/NJ MGP_FVBNJ_G0032501
protein coding gene Chr7:103239336-103242562 (-)
LP/J MGP_LPJ_G0032563
protein coding gene Chr7:107873915-107876522 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032464
protein coding gene Chr7:115664964-115666259 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033237
protein coding gene Chr7:106991433-106993543 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0031311
protein coding gene Chr7:93950255-93952352 (+)
WSB/EiJ MGP_WSBEiJ_G0031868
protein coding gene Chr7:107707844-107710965 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Usp17lb
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 381944 NCBI Gene Model | MGI Sequence Detail 2341 C57BL/6J ±  kb
transcript NM_201409 RefSeq | MGI Sequence Detail 1541 C57BL/6  
polypeptide E9Q9U0 UniProt | EBI | MGI Sequence Detail 468 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • EC
  • InterPro Domains
    IPR038765 Papain-like cysteine peptidase superfamily
    IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase
    IPR018200 Ubiquitin specific protease, conserved site
    IPR028889 Ubiquitin specific protease domain
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 28
    Gene Ontology 5
    Phenotypes 9
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
09/10/2019
MGI 6.14
The Jackson Laboratory