C230029F24Rik Gene Detail

Summary

• Symbol
  C230029F24Rik
• Name
  RIKEN cDNA C230029F24 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3045370
  NCBI Gene: 442837
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:49283775-49379590 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 25.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2532 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3045370	lncRNA gene	Chr1:49283775-49379602 (+)
129S1/SvImJ	ENSMUSG00200002017	lncRNA gene	Chr1:46772070-46867466 (+)
A/J	ENSMUSG00195002015	lncRNA gene	Chr1:46658582-46754454 (+)
AKR/J	ENSMUSG00220004039	lncRNA gene	Chr1:46426329-46521701 (+)
BALB/cJ	ENSMUSG00180003370	lncRNA gene	Chr1:46574115-46669463 (+)
C3H/HeJ	ENSMUSG00175000121	lncRNA gene	Chr1:46688310-46784154 (+)
C57BL/6NJ	ENSMUSG00215003143	lncRNA gene	Chr1:46611695-46707527 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004373	lincRNA gene	Chr1:44529742-44606122 (-)
CAST/EiJ	ENSTCUG00005000924	lncRNA gene	Chr1:46498178-46576706 (+)
CBA/J	ENSMUSG00210029281	lncRNA gene	Chr1:46392081-46487952 (+)
DBA/2J	ENSMUSG00185030707	lncRNA gene	Chr1:47511638-47607486 (+)
FVB/NJ	ENSMUSG00205004260	lncRNA gene	Chr1:46338130-46433984 (+)
JF1/MsJ	ENSUMUG00000001937	lncRNA gene	Chr1:46441435-46519945 (+)
LP/J	ENSMUSG00230001550	lncRNA gene	Chr1:47505736-47601549 (+)
NOD/ShiLtJ	ENSMUSG00190002597	lncRNA gene	Chr1:46530048-46625905 (+)
NZO/HlLtJ	ENSMUSG00225001166	lncRNA gene	Chr1:50707903-50803771 (+)
PWK/PhJ	ENSLUMG00010002826	lncRNA gene	Chr1:45624288-45709646 (-)
SPRET/EiJ	ENSMSPG00010013252	lncRNA gene	Chr1:47650652-47720454 (+)
WSB/EiJ	ENSIUOG00005003699	lncRNA gene	Chr1:46213271-46309109 (+)

Homology

• Gene Tree
  C230029F24Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving C230029F24Rik
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  10 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000051616 (Evidence)
• NCBI Gene
  442837

Representative Sequences			Length	Strain/Species
genomic	442837	NCBI Gene Model | MGI Sequence Detail	95816	C57BL/6J
transcript	NR_151585	RefSeq | MGI Sequence Detail	542	C57BL/6
polypeptide	Q8BHV2	UniProt | EBI | MGI Sequence Detail	154	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 1

References

• Summaries
  All 14

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45