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A530053M12Rik Gene Detail
Summary
  • Symbol
    A530053M12Rik
  • Name
    RIKEN cDNA A530053M12 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3045369
    NCBI Gene: 442836
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr1:106327908-106329717 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 1, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    56 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3045369
lncRNA gene Chr1:106327908-106329717 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004935
lincRNA gene Chr1:108557207-108559003 (-)
A/J MGP_AJ_G0004917
lincRNA gene Chr1:104753943-104755763 (-)
AKR/J MGP_AKRJ_G0004894
lincRNA gene Chr1:107619502-107621322 (-)
BALB/cJ MGP_BALBcJ_G0004898
lincRNA gene Chr1:104857502-104859322 (-)
C3H/HeJ MGP_C3HHeJ_G0004847
lincRNA gene Chr1:108072633-108074453 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005048
lincRNA gene Chr1:112694916-112696725 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004468
lincRNA gene Chr1:99076279-99078080 (-)
CAST/EiJ MGP_CASTEiJ_G0004796
lincRNA gene Chr1:106996361-106998145 (-)
CBA/J MGP_CBAJ_G0004839
lincRNA gene Chr1:116548357-116550177 (-)
DBA/2J MGP_DBA2J_G0004858
lincRNA gene Chr1:103824823-103826619 (-)
FVB/NJ MGP_FVBNJ_G0004877
lincRNA gene Chr1:102772438-102774258 (-)
LP/J MGP_LPJ_G0004936
lincRNA gene Chr1:109808477-109810273 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004862
lincRNA gene Chr1:120984460-120986269 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005053
lincRNA gene Chr1:107705256-107707076 (-)
PWK/PhJ MGP_PWKPhJ_G0004749
lincRNA gene Chr1:102858057-102859842 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004674
lincRNA gene Chr1:106379318-106381128 (-)
WSB/EiJ MGP_WSBEiJ_G0004843
lincRNA gene Chr1:107542867-107544688 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Genomic Mutations
    3 involving A530053M12Rik
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000100247 Ensembl Gene Model | MGI Sequence Detail 1810 C57BL/6J ±  kb
transcript ENSMUST00000187918 Ensembl | MGI Sequence Detail 1467 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 11
    Phenotypes 4
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory