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1600029O15Rik
Pseudogene Detail
 Symbol
Name
ID
1600029O15Rik
RIKEN cDNA 1600029O15 gene
MGI:3045362
Feature Type pseudogene
Genetic Map
Chromosome 9
31.63 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr9:58202897-58208808 bp, + strand
From VEGA annotation of GRCm38

  5912 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Protein SuperFamily: ribosomal protein L17
Gene Tree: 1600029O15Rik
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(3)
Expression
cDNA source data(1)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(1) cDNA(1)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000042337 (Evidence)
Ensembl Gene ModelENSMUSG00000057818 (Evidence)
Entrez Gene665268 (Evidence)
UniGene451475
DFCITC1593522
DoTSDT.91537568
NIA Mouse Gene IndexU116844
International Mouse Knockout Project Status1600029O15Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000042337 VEGA Gene Model | MGI Sequence Detail 5912 C57BL/6J ±  kb
transcript OTTMUST00000111540 VEGA | MGI Sequence Detail 1809 Not Applicable 
polypeptide Q9DAS6 UniProt | EBI | MGI Sequence Detail 209 Not Applicable 

For the selected sequences
All sequences(14) RefSeq(1) UniProt(1)
Polymorphisms SNPs within 2kb(44 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001063 Ribosomal protein L22/L17
InterPro IPR018260 Ribosomal protein L22/L17, conserved site
InterPro IPR005721 Ribosomal protein L22/L17, eukaryotic/archaeal
References (Earliest) J:91812 Stryke D, et al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Nucleic Acids Res. 2003 Jan 1;31(1):278-81
(Latest) J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
All references(17)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory