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Tctex1d4 Gene Detail
Summary
  • Symbol
    Tctex1d4
  • Name
    Tctex1 domain containing 4
  • Synonyms
    4833401D15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3045358
    NCBI Gene: 242646
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:117126794-117128738 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 53.41 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    37 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3045358
protein coding gene Chr4:117124548-117128738 (.)
129S1/SvImJ MGP_129S1SvImJ_G0028644
protein coding gene Chr4:118085863-118087807 (+)
A/J MGP_AJ_G0028605
protein coding gene Chr4:113537823-113539783 (+)
AKR/J MGP_AKRJ_G0028555
protein coding gene Chr4:116015630-116017574 (+)
BALB/cJ MGP_BALBcJ_G0028626
protein coding gene Chr4:114164809-114166767 (+)
C3H/HeJ MGP_C3HHeJ_G0028340
protein coding gene Chr4:117582644-117584602 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029067
protein coding gene Chr4:122638114-122640058 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026351
protein coding gene Chr4:107578199-107580160 (+)
CAST/EiJ MGP_CASTEiJ_G0027774
protein coding gene Chr4:114798530-114800485 (+)
CBA/J MGP_CBAJ_G0028307
protein coding gene Chr4:125991927-125993885 (+)
DBA/2J MGP_DBA2J_G0028455
protein coding gene Chr4:114173109-114175069 (+)
FVB/NJ MGP_FVBNJ_G0028423
protein coding gene Chr4:112672547-112674505 (+)
LP/J MGP_LPJ_G0028557
protein coding gene Chr4:118264576-118266520 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028450
protein coding gene Chr4:130934623-130936567 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029104
protein coding gene Chr4:117162972-117164916 (+)
PWK/PhJ MGP_PWKPhJ_G0027500
protein coding gene Chr4:110968431-110970325 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027323
protein coding gene Chr4:113460716-113462690 (+)
WSB/EiJ MGP_WSBEiJ_G0027853
protein coding gene Chr4:117031650-117033610 (+)



Homology
more
  • Human Ortholog
    TCTEX1D4, Tctex1 domain containing 4
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TCTEX1D4, Tctex1 domain containing 4
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 343521
    neXtProt AC: NX_Q5JR98
    UniProt: Q5JR98

  • Chr Location
    1p34.1; chr1:44805908-44807456 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
  • All Mutations and Alleles
    17
  • Chemically induced (other)
    2
  • Gene trapped
    11
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    4 involving Tctex1d4
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000047671 Ensembl Gene Model | MGI Sequence Detail 1945 C57BL/6J ±  kb
transcript ENSMUST00000062206 Ensembl | MGI Sequence Detail 990 Not Applicable  
polypeptide ENSMUSP00000052243 Ensembl | MGI Sequence Detail 219 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 30
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 12
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:201079 Korrodi-Gregorio L, et al., TCTEX1D4, a novel protein phosphatase 1 interactor: connecting the phosphatase to the microtubule network. Biol Open. 2013 May 15;2(5):453-65

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory