Rnf182
Gene Detail

Symbol Name ID

Rnf182 ring finger protein 182 MGI:3045355

Synonyms

C630023L15Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 13

21.60 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr13:43615710-43670945 bp, + strand From VEGA annotation of GRCm38   55236 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:17656  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Rnf182

Human homologs

Human Homolog		RNF182, ring finger protein 182
NCBI Gene ID		221687
neXtProt AC		NX_Q8N6D2
Human Chr (Location)		6p23; chr6:13924677-13980240 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(2) : Targeted(2)

Gene Ontology (GO) classifications

All GO classifications: (9 annotations)

Process	protein ubiquitination
Component	cytoplasm, integral to membrane, ...
Function	ligase activity, metal ion binding, ...

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (42)    Tissues (3)    Images (23)
Theiler Stages: 23

Assay Type	Results
RNA in situ	42

cDNA source data(10)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(10) cDNA(10)
Microarray probesets(4)

Other database links

VEGA Gene Model	OTTMUSG00000029082 (Evidence)
Ensembl Gene Model	ENSMUSG00000044164 (Evidence)
Entrez Gene	328234 (Evidence)
UniGene	40588
DFCI	TC1586463, TC1621721
DoTS	DT.110972602, DT.55281520, DT.60104203
NIA Mouse Gene Index	U052493
EC	6.3.2.-
Consensus CDS Project	CCDS26480.1
International Mouse Knockout Project Status	Rnf182

Sequences

Length	Strain/Species
genomic	OTTMUSG00000029082	VEGA Gene Model | MGI Sequence Detail	55236	C57BL/6J
transcript	OTTMUST00000072135	VEGA | MGI Sequence Detail	3544	Not Applicable
polypeptide	OTTMUSP00000037061	VEGA | MGI Sequence Detail	247	Not Applicable

All sequences(26) RefSeq(2) UniProt(2)

Polymorphisms

SNPs(198 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR013083	Zinc finger, RING/FYVE/PHD-type
InterPro	IPR001841	Zinc finger, RING-type
InterPro	IPR017907	Zinc finger, RING-type, conserved site
Protein Ontology	PR:000014108	E3 ubiquitin-protein ligase RNF182

References

(Earliest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(27)