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Slc7a15
Gene Detail
Symbol

Name
ID
Slc7a15
solute carrier family 7 (cationic amino acid transporter, y+ system), member 15
MGI:3045351
Synonyms
2010001P20Rik, 9030221C07Rik, Arpat
Feature Type
protein coding gene
Genetic Map
Chromosome 12
3.89 cM, cytoband A1.3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr12:8528483-8599066 bp, - strand
From VEGA annotation of GRCm38

  70584 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:77627  Vertebrate Homology Class
1 mouse; 1 rat; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: SLC7A15P
Protein SuperFamily: amino acid transporter
Gene Tree: Slc7a15

Human
homologs
SLC7A15P, solute carrier family 7, member 15, pseudogene
Orthology source: HGNC

IDs:
NCBI Gene ID: 100289450

Human Synonyms: ARPAT

Human Chr (Location): chr2:20386386-20396585 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Slc7a15 interacts with 162 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
Expression
cDNA source data(2)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase slc7a15    NEW 
Molecular
reagents
All nucleic(4) cDNA(2) Other(2)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000027490 (Evidence)
Ensembl Gene Model ENSMUSG00000020600 (Evidence)
Entrez Gene 328059 (Evidence)
UniGene 46326
DFCI TC1591973, TC1592381
DoTS DT.110954758, DT.55119070, DT.94264895
NIA Mouse Gene Index U033793
Consensus CDS Project CCDS25800.1, CCDS25801.1
International Mouse Phenotyping Consortium Status Slc7a15
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027490 VEGA Gene Model | MGI Sequence Detail 70584 C57BL/6J ±  kb
transcript OTTMUST00000068037 VEGA | MGI Sequence Detail 1467 Not Applicable 
polypeptide OTTMUSP00000034321 VEGA | MGI Sequence Detail 488 Not Applicable 

For the selected sequences
All sequences(44) RefSeq(14) UniProt(3)
Polymorphisms
SNPs within 2kb(369 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002293 Amino acid/polyamine transporter I
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(24)
Other
accession IDs
MGI:1917077

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory