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Cdcp2 Gene Detail
Summary
  • Symbol
    Cdcp2
  • Name
    CUB domain containing protein 2
  • Synonyms
    D030010E02Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3045328
    NCBI Gene: 242603
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:107096891-107107748 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 50.02 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    64 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3045328
protein coding gene Chr4:107096891-107113125 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028531
protein coding gene Chr4:107766638-107777660 (+)
A/J MGP_AJ_G0028494
protein coding gene Chr4:103905041-103915905 (+)
AKR/J MGP_AKRJ_G0028441
protein coding gene Chr4:106441418-106455861 (+)
BALB/cJ MGP_BALBcJ_G0028513
protein coding gene Chr4:104095451-104106767 (+)
C3H/HeJ MGP_C3HHeJ_G0028227
protein coding gene Chr4:107196239-107207122 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028953
protein coding gene Chr4:111647517-111658381 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026244
protein coding gene Chr4:99184955-99196336 (+)
CAST/EiJ MGP_CASTEiJ_G0027663
protein coding gene Chr4:105010641-105021325 (+)
CBA/J MGP_CBAJ_G0028196
protein coding gene Chr4:115261236-115272100 (+)
DBA/2J MGP_DBA2J_G0028344
protein coding gene Chr4:103522175-103533027 (+)
FVB/NJ MGP_FVBNJ_G0028312
protein coding gene Chr4:102390870-102401801 (+)
LP/J MGP_LPJ_G0028445
protein coding gene Chr4:107963916-107974793 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028338
protein coding gene Chr4:120562762-120573626 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028989
protein coding gene Chr4:106683482-106694371 (+)
PWK/PhJ MGP_PWKPhJ_G0027389
protein coding gene Chr4:101769551-101780360 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027213
protein coding gene Chr4:104087116-104097941 (+)
WSB/EiJ MGP_WSBEiJ_G0027744
protein coding gene Chr4:106867814-106879847 (+)



Homology
more
  • Human Ortholog
    CDCP2, CUB domain containing protein 2
  • Vertebrate Orthologs
    3
  • Human Ortholog
    CDCP2, CUB domain containing protein 2
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 200008
    neXtProt AC: NX_Q5VXM1
    UniProt: Q5VXM1

  • Chr Location
    1p32.3; chr1:54138995-54153006 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    4 involving Cdcp2
  • Incidental Mutations
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 242603 NCBI Gene Model | MGI Sequence Detail 10858 C57BL/6J ±  kb
transcript NM_172873 RefSeq | MGI Sequence Detail 2611 C57BL/6  
polypeptide Q8BQH6 UniProt | EBI | MGI Sequence Detail 427 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 26
    Gene Ontology 1
    Phenotypes 11
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/11/2019
MGI 6.14
The Jackson Laboratory