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Rgag4 Gene Detail
Summary
  • Symbol
    Rgag4
  • Name
    retrotransposon gag domain containing 4
  • Synonyms
    6430402L03Rik, Mar5, Mart5
  • Feature Type
    protein coding gene
  • IDs
    MGI:3045324
    NCBI Gene: 331474
Location & Maps
more
  • Sequence Map
    ChrX:102066544-102071304 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      4761 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome X, 45.06 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    RGAG4, retrotransposon gag domain containing 4
  • Vertebrate Orthologs
    6
  • Human Ortholog
    RGAG4, retrotransposon gag domain containing 4
    Orthology source: HomoloGene, HGNC
  • Synonyms
    6430402L03Rik, MAR5, MART5
  • Links
    NCBI Gene ID: 340526
    neXtProt AC: NX_Q5HYW3

  • Chr Location
    Xq13.1; chrX:72127110-72131901 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000018291 VEGA Gene Model | MGI Sequence Detail 4761 C57BL/6J ±  kb
transcript OTTMUST00000044194 VEGA | MGI Sequence Detail 4653 Not Applicable  
polypeptide OTTMUSP00000019871 VEGA | MGI Sequence Detail 599 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    19 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 20
    cDNA 19
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 21
    Developmental Gene Expression 3
    Phenotypes 1
  • Earliest
    J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. http://www.gudmap.org. 2004;
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory