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Mgat4f Gene Detail
Summary
  • Symbol
    Mgat4f
  • Name
    MGAT4 family, member F
  • Synonyms
    4933406M09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3045320
    NCBI Gene: 240755
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:134385940-134390981 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 58.21 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    44 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3045320
protein coding gene Chr1:134385931-134391502 (+)
129S1/SvImJ MGP_129S1SvImJ_G0016505
protein coding gene Chr1:138043263-138048300 (+)
A/J MGP_AJ_G0016488
protein coding gene Chr1:132849823-132854864 (+)
AKR/J MGP_AKRJ_G0016453
protein coding gene Chr1:136810714-136815763 (+)
BALB/cJ MGP_BALBcJ_G0016448
protein coding gene Chr1:133184386-133189427 (+)
C3H/HeJ MGP_C3HHeJ_G0016274
protein coding gene Chr1:136914186-136919223 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016909
protein coding gene Chr1:143077023-143082064 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014620
protein coding gene Chr1:125987262-125992698 (+)
CAST/EiJ MGP_CASTEiJ_G0015854
protein coding gene Chr1:135965495-135970603 (+)
CBA/J MGP_CBAJ_G0016247
protein coding gene Chr1:148040523-148045552 (+)
DBA/2J MGP_DBA2J_G0016353
protein coding gene Chr1:131860566-131865619 (+)
FVB/NJ MGP_FVBNJ_G0016352
protein coding gene Chr1:130490464-130495525 (+)
LP/J MGP_LPJ_G0016424
protein coding gene Chr1:139324903-139329944 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016377
protein coding gene Chr1:153724500-153729529 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016945
protein coding gene Chr1:136544468-136549505 (+)
PWK/PhJ MGP_PWKPhJ_G0015640
protein coding gene Chr1:130882175-130889540 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015427
protein coding gene Chr1:135516896-135521875 (+)
WSB/EiJ MGP_WSBEiJ_G0015917
protein coding gene Chr1:136578647-136583696 (+)



Homology
more
  • Human Ortholog
    MGAT4FP, MGAT4 family member F, pseudogene
  • Vertebrate Orthologs
    3
  • Human Ortholog
    MGAT4FP, MGAT4 family member F, pseudogene
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 100506747

  • Chr Location
    chr1:202986452-203007265 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000050526 Ensembl Gene Model | MGI Sequence Detail 5042 C57BL/6J ±  kb
transcript ENSMUST00000162187 Ensembl | MGI Sequence Detail 1768 Not Applicable  
polypeptide ENSMUSP00000124251 Ensembl | MGI Sequence Detail 479 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR006759 Glycosyl transferase family 54
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 11
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/26/2019
MGI 6.14
The Jackson Laboratory