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Krt90 Gene Detail
Summary
  • Symbol
    Krt90
  • Name
    keratin 90
  • Synonyms
    4732456N10Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3045312
    NCBI Gene: 239673
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr15:101552356-101562950 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      10595 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 56.90 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    KRT90P, keratin 90 pseudogene
  • Vertebrate Orthologs
    4
  • Human Ortholog
    KRT90P, keratin 90 pseudogene
    Orthology source: HGNC
  • Synonyms
    HBA, KRT124P, KRTHBP1
  • Links
    NCBI Gene ID: 85340

  • Chr Location
    12q13.13; chr12:52413861-52419240 (-)  GRCh38.p7

Human Diseases
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  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotypes from 1 allele in 2 genetic backgrounds
    3 images
    27 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a spontaneous mutation exhibit partial prenatal lethality and thickened long toenails. An increased caudal vertebrae number is observed in some mutant mice.
Gene Ontology
(GO)
Classifications
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Expression
less
  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000028034 VEGA Gene Model | MGI Sequence Detail 10595 C57BL/6J ±  kb
transcript OTTMUST00000069432 VEGA | MGI Sequence Detail 2534 Not Applicable  
polypeptide OTTMUSP00000035259 VEGA | MGI Sequence Detail 538 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    108 from dbSNP Build 142
Protein
Information
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  • UniProt
    3 Sequences
  • InterPro Domains
    IPR001664 Intermediate filament protein
    IPR018039 Intermediate filament protein, conserved site
    IPR003054 Keratin, type II
    IPR032444 Keratin type II head
Molecular
Reagents
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  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 41
    Diseases 1
    Phenotypes 27
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/05/2017
MGI 6.11
The Jackson Laboratory