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Ccdc142 Gene Detail
Summary
  • Symbol
    Ccdc142
  • Name
    coiled-coil domain containing 142
  • Synonyms
    A230058J24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3045292
    NCBI Gene: 243510
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:83101601-83108394 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 35.94 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    31 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3045292
protein coding gene Chr6:83101516-83109121 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030917
protein coding gene Chr6:84105184-84115834 (+)
A/J MGP_AJ_G0030886
protein coding gene Chr6:80892956-80899552 (+)
AKR/J MGP_AKRJ_G0030814
protein coding gene Chr6:83221397-83227985 (+)
BALB/cJ MGP_BALBcJ_G0030896
protein coding gene Chr6:80905731-80912434 (+)
C3H/HeJ MGP_C3HHeJ_G0030814
protein coding gene Chr6:101152838-101159374 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031356
protein coding gene Chr6:86392482-86399053 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028542
protein coding gene Chr6:79251746-79258149 (+)
CAST/EiJ MGP_CASTEiJ_G0030005
protein coding gene Chr6:83230906-83237406 (+)
CBA/J MGP_CBAJ_G0030583
protein coding gene Chr6:89801647-89810361 (+)
DBA/2J MGP_DBA2J_G0030736
protein coding gene Chr6:80213104-80219564 (+)
FVB/NJ MGP_FVBNJ_G0030689
protein coding gene Chr6:79419963-79426707 (+)
LP/J MGP_LPJ_G0030815
protein coding gene Chr6:84101432-84107917 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030725
protein coding gene Chr6:94121654-94128269 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031380
protein coding gene Chr6:83038419-83045028 (+)
PWK/PhJ MGP_PWKPhJ_G0029720
protein coding gene Chr6:79106267-79112898 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029548
protein coding gene Chr6:81885400-81891796 (+)
WSB/EiJ MGP_WSBEiJ_G0030086
protein coding gene Chr6:83475721-83482243 (+)



Homology
more
  • Human Ortholog
    CCDC142, coiled-coil domain containing 142
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CCDC142, coiled-coil domain containing 142
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 84865
    neXtProt AC: NX_Q17RM4
    UniProt: Q17RM4

  • Chr Location
    2p13.1; chr2:74472832-74483230 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107499 Ensembl Gene Model | MGI Sequence Detail 6794 C57BL/6J ±  kb
transcript ENSMUST00000101254 Ensembl | MGI Sequence Detail 2317 Not Applicable  
polypeptide ENSMUSP00000098812 Ensembl | MGI Sequence Detail 738 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Phenotypes 3
  • Earliest
    J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
  • Latest
    J:241559 Ackert-Bicknell CL, et al., A chromosomal inversion within a quantitative trait locus has a major effect on adipogenesis and osteoblastogenesis. Ann N Y Acad Sci. 2007 Nov;1116:291-305

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/19/2021
MGI 6.16
The Jackson Laboratory