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Ccdc142 Gene Detail
Summary
  • Symbol
    Ccdc142
  • Name
    coiled-coil domain containing 142
  • Synonyms
    A230058J24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3045292
    NCBI Gene: 243510
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:83101601-83108394 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 35.94 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    31 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3045292
protein coding gene Chr6:83101516-83109121 (.)
129S1/SvImJ MGP_129S1SvImJ_G0030917
protein coding gene Chr6:84105184-84115834 (+)
A/J MGP_AJ_G0030886
protein coding gene Chr6:80892956-80899552 (+)
AKR/J MGP_AKRJ_G0030814
protein coding gene Chr6:83221397-83227985 (+)
BALB/cJ MGP_BALBcJ_G0030896
protein coding gene Chr6:80905731-80912434 (+)
C3H/HeJ MGP_C3HHeJ_G0030814
protein coding gene Chr6:101152838-101159374 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031356
protein coding gene Chr6:86392482-86399053 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028542
protein coding gene Chr6:79251746-79258149 (+)
CAST/EiJ MGP_CASTEiJ_G0030005
protein coding gene Chr6:83230906-83237406 (+)
CBA/J MGP_CBAJ_G0030583
protein coding gene Chr6:89801647-89810361 (+)
DBA/2J MGP_DBA2J_G0030736
protein coding gene Chr6:80213104-80219564 (+)
FVB/NJ MGP_FVBNJ_G0030689
protein coding gene Chr6:79419963-79426707 (+)
LP/J MGP_LPJ_G0030815
protein coding gene Chr6:84101432-84107917 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030725
protein coding gene Chr6:94121654-94128269 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031380
protein coding gene Chr6:83038419-83045028 (+)
PWK/PhJ MGP_PWKPhJ_G0029720
protein coding gene Chr6:79106267-79112898 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029548
protein coding gene Chr6:81885400-81891796 (+)
WSB/EiJ MGP_WSBEiJ_G0030086
protein coding gene Chr6:83475721-83482243 (+)



Homology
more
  • Human Ortholog
    CCDC142, coiled-coil domain containing 142
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CCDC142, coiled-coil domain containing 142
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 84865
    neXtProt AC: NX_Q17RM4
    UniProt: Q17RM4

  • Chr Location
    2p13.1; chr2:74472832-74483230 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107499 Ensembl Gene Model | MGI Sequence Detail 6794 C57BL/6J ±  kb
transcript ENSMUST00000101254 Ensembl | MGI Sequence Detail 2317 Not Applicable  
polypeptide ENSMUSP00000098812 Ensembl | MGI Sequence Detail 738 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 1
References
more
  • Summaries
    All 15
    Phenotypes 2
  • Earliest
    J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
  • Latest
    J:105810 Akeson EC, et al., Chromosomal inversion discovered in C3H/HeJ mice. Genomics. 2006 Feb;87(2):311-3

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/11/2018
MGI 6.13
The Jackson Laboratory