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D130007C19Rik Gene Detail
Summary
  • Symbol
    D130007C19Rik
  • Name
    RIKEN cDNA D130007C19 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3045257
    NCBI Gene: 442805
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:123785865-123811062 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 57.42 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    104 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3045257
 lncRNA gene Chr4:123785865-123811062 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036449
 pseudogene Chr4:125387875-125389388 (-)
A/J MGP_AJ_G0036434
 pseudogene Chr4:120468869-120470367 (-)
AKR/J MGP_AKRJ_G0036385
 pseudogene Chr4:123773536-123775042 (-)
BALB/cJ MGP_BALBcJ_G0036426
 pseudogene Chr4:121067596-121069456 (-)
C3H/HeJ MGP_C3HHeJ_G0036117
 pseudogene Chr4:123873051-123874547 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036938
 pseudogene Chr4:130223769-130225228 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0034045
 pseudogene Chr4:113671694-113673173 (-)
CAST/EiJ MGP_CASTEiJ_G0035313
 pseudogene Chr4:121884171-121885692 (-)
CBA/J MGP_CBAJ_G0036089
 pseudogene Chr4:133520171-133521670 (-)
DBA/2J MGP_DBA2J_G0036265
 pseudogene Chr4:120973113-120974898 (-)
FVB/NJ MGP_FVBNJ_G0036220
 pseudogene Chr4:119587204-119588634 (-)
LP/J MGP_LPJ_G0036317
 pseudogene Chr4:125684679-125686188 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0036221
 pseudogene Chr4:138486025-138487516 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0037047
 pseudogene Chr4:124132975-124134475 (-)
PWK/PhJ MGP_PWKPhJ_G0035010
 pseudogene Chr4:117362571-117364133 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034827
 pseudogene Chr4:119895016-119896583 (-)
WSB/EiJ MGP_WSBEiJ_G0035506
 pseudogene Chr4:124203420-124204944 (-)



Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    2
  • Gene trapped
    5
  • Radiation induced
    1
  • Genomic Mutations
    3 involving D130007C19Rik
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
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  • All Sequences
    29
  • RefSeq
    4
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 442805 NCBI Gene Model | MGI Sequence Detail 25198 C57BL/6J ±  kb
transcript AK132422 GenBank | ENA | DDBJ | MGI Sequence Detail 2442 C57BL/6J  
polypeptide Q8BQA5 UniProt | EBI | MGI Sequence Detail 180 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 15
    Phenotypes 6
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory