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BC040756 Gene Detail
Summary
  • Symbol
    BC040756
  • Name
    cDNA sequence BC040756
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3041251
    NCBI Gene: 414073
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr17:46662573-46668075 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    33 from dbSNP Build 142
  • Strain Annotations
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3041251
lncRNA gene Chr17:46662573-46668075 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Expression
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  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 414073 NCBI Gene Model | MGI Sequence Detail 5503 C57BL/6J ±  kb
transcript BC040756 GenBank | ENA | DDBJ | MGI Sequence Detail 3105 FVB/N  
polypeptide Q8CGD4 UniProt | EBI | MGI Sequence Detail 254 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • InterPro Domains
    IPR003036 Core shell protein Gag P30
    IPR040643 Murine leukemia virus integrase, C-terminal
    IPR008919 Retrovirus capsid, N-terminal
Molecular
Reagents
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  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 13
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
11/26/2022
MGI 6.22
The Jackson Laboratory