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BC024978 Gene Detail
Summary
  • Symbol
    BC024978
  • Name
    cDNA sequence BC024978
  • Feature Type
    protein coding gene
  • IDs
    MGI:3041247
    NCBI Gene: 414069
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:27195781-27210184 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 15.84 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    22 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3041247
protein coding gene Chr7:27195781-27210186 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031902
protein coding gene Chr7:25815032-25831333 (+)
A/J MGP_AJ_G0031881
protein coding gene Chr7:25209644-25220512 (+)
AKR/J MGP_AKRJ_G0031811
protein coding gene Chr7:25875104-25891005 (+)
BALB/cJ MGP_BALBcJ_G0031886
protein coding gene Chr7:25433843-25441529 (+)
C3H/HeJ MGP_C3HHeJ_G0031608
protein coding gene Chr7:26257217-26274109 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032351
protein coding gene Chr7:26669820-26687486 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029403
protein coding gene Chr7:26446788-26461248 (+)
CAST/EiJ MGP_CASTEiJ_G0030943
protein coding gene Chr7:19556227-19572270 (+)
CBA/J MGP_CBAJ_G0031573
protein coding gene Chr7:27838891-27865432 (+)
DBA/2J MGP_DBA2J_G0031725
protein coding gene Chr7:25010432-25025065 (+)
FVB/NJ MGP_FVBNJ_G0031681
protein coding gene Chr7:25093682-25110946 (+)
LP/J MGP_LPJ_G0031805
protein coding gene Chr7:26159102-26174752 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031716
protein coding gene Chr7:27448061-27458221 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032382
protein coding gene Chr7:25406888-25416463 (+)
PWK/PhJ MGP_PWKPhJ_G0030667
protein coding gene Chr7:20042399-20057086 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030501
protein coding gene Chr7:16395525-16411887 (+)
WSB/EiJ MGP_WSBEiJ_G0031051
protein coding gene Chr7:25697822-25712089 (+)



Homology
more
  • Human Ortholog
    C19orf54, chromosome 19 open reading frame 54
  • Vertebrate Orthologs
    8
  • Human Ortholog
    C19orf54, chromosome 19 open reading frame 54
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 284325
    neXtProt AC: NX_Q5BKX5
    UniProt: Q5BKX5

  • Chr Location
    19q13.2; chr19:40740856-40750713 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    4 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 414069 NCBI Gene Model | MGI Sequence Detail 14404 C57BL/6J ±  kb
transcript NM_001290513 RefSeq | MGI Sequence Detail 2447 C57BL/6  
polypeptide NP_001230817 RefSeq | MGI Sequence Detail 361 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR040043 UPF0692 protein
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Phenotypes 4
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/12/2021
MGI 6.16
The Jackson Laboratory