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BC024978 Gene Detail
Summary
  • Symbol
    BC024978
  • Name
    cDNA sequence BC024978
  • Feature Type
    protein coding gene
  • IDs
    MGI:3041247
    NCBI Gene: 414069
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:27195781-27206123 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 15.84 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3041247
protein coding gene Chr7:27195781-27210186 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031902
protein coding gene Chr7:25815032-25831333 (+)
A/J MGP_AJ_G0031881
protein coding gene Chr7:25209644-25220512 (+)
AKR/J MGP_AKRJ_G0031811
protein coding gene Chr7:25875104-25891005 (+)
BALB/cJ MGP_BALBcJ_G0031886
protein coding gene Chr7:25433843-25441529 (+)
C3H/HeJ MGP_C3HHeJ_G0031608
protein coding gene Chr7:26257217-26274109 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032351
protein coding gene Chr7:26669820-26687486 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029403
protein coding gene Chr7:26446788-26461248 (+)
CAST/EiJ MGP_CASTEiJ_G0030943
protein coding gene Chr7:19556227-19572270 (+)
CBA/J MGP_CBAJ_G0031573
protein coding gene Chr7:27838891-27865432 (+)
DBA/2J MGP_DBA2J_G0031725
protein coding gene Chr7:25010432-25025065 (+)
FVB/NJ MGP_FVBNJ_G0031681
protein coding gene Chr7:25093682-25110946 (+)
LP/J MGP_LPJ_G0031805
protein coding gene Chr7:26159102-26174752 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031716
protein coding gene Chr7:27448061-27458221 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032382
protein coding gene Chr7:25406888-25416463 (+)
PWK/PhJ MGP_PWKPhJ_G0030667
protein coding gene Chr7:20042399-20057086 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030501
protein coding gene Chr7:16395525-16411887 (+)
WSB/EiJ MGP_WSBEiJ_G0031051
protein coding gene Chr7:25697822-25712089 (+)



Homology
more
  • Human Ortholog
    C19orf54, chromosome 19 open reading frame 54
  • Vertebrate Orthologs
    8
  • Human Ortholog
    C19orf54, chromosome 19 open reading frame 54
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 284325
    neXtProt AC: NX_Q5BKX5
    UniProt: Q5BKX5

  • Chr Location
    19q13.2; chr19:40740856-40750713 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 414069 NCBI Gene Model | MGI Sequence Detail 10343 C57BL/6J ±  kb
transcript NM_001290513 RefSeq | MGI Sequence Detail 2447 C57BL/6  
polypeptide NP_001230817 RefSeq | MGI Sequence Detail 361 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR040043 UPF0692 protein
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Phenotypes 4
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory