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Ccdc157 Gene Detail
Summary
  • Symbol
    Ccdc157
  • Name
    coiled-coil domain containing 157
  • Synonyms
    4930562D19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3041210
    NCBI Gene: 216516
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:4141123-4160293 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 2.90 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    105 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3041210
protein coding gene Chr11:4141123-4160293 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017976
protein coding gene Chr11:1069075-1090306 (-)
A/J MGP_AJ_G0017949
protein coding gene Chr11:1084249-1103476 (-)
AKR/J MGP_AKRJ_G0017913
protein coding gene Chr11:1140090-1159175 (-)
BALB/cJ MGP_BALBcJ_G0017917
protein coding gene Chr11:1052865-1072644 (-)
C3H/HeJ MGP_C3HHeJ_G0017730
protein coding gene Chr11:1033057-1052151 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018370
protein coding gene Chr11:1154106-1173281 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016028
protein coding gene Chr11:961761-981765 (-)
CAST/EiJ MGP_CASTEiJ_G0017292
protein coding gene Chr11:999499-1018446 (-)
CBA/J MGP_CBAJ_G0017705
protein coding gene Chr11:1391693-1414805 (-)
DBA/2J MGP_DBA2J_G0017816
protein coding gene Chr11:985362-1007182 (-)
FVB/NJ MGP_FVBNJ_G0017807
protein coding gene Chr11:1020127-1041108 (-)
LP/J MGP_LPJ_G0017886
protein coding gene Chr11:1177671-1197933 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017833
protein coding gene Chr11:1065723-1085875 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018409
protein coding gene Chr11:1141691-1165649 (-)
PWK/PhJ MGP_PWKPhJ_G0017073
protein coding gene Chr11:991069-1010704 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016869
protein coding gene Chr11:1093841-1114380 (-)
WSB/EiJ MGP_WSBEiJ_G0017346
protein coding gene Chr11:1009742-1030238 (-)



Homology
more
  • Human Ortholog
    CCDC157, coiled-coil domain containing 157
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CCDC157, coiled-coil domain containing 157
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 550631
    neXtProt AC: NX_Q569K6
    UniProt: Q569K6

  • Chr Location
    chr22:30356635-30378655 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 216516 NCBI Gene Model | MGI Sequence Detail 19171 C57BL/6J ±  kb
transcript NM_177616 RefSeq | MGI Sequence Detail 5153 C57BL/6  
polypeptide Q5SPX1 UniProt | EBI | MGI Sequence Detail 718 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 34
    cDNA 34

    Microarray probesets 3
References
more
  • Summaries
    All 21
    Phenotypes 2
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/26/2019
MGI 6.14
The Jackson Laboratory