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C130026L21Rik Gene Detail
Summary
  • Symbol
    C130026L21Rik
  • Name
    RIKEN cDNA C130026L21 gene
Location &
Maps
more
  • Sequence Map
    Chr5:111581561-111587153 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 54.06 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3041189
lncRNA gene Chr5:111581422-111604932 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006751
lincRNA gene Chr5:114096449-114122952 (+)
A/J MGP_AJ_G0006745
lincRNA gene Chr5:109671650-109695227 (+)
AKR/J MGP_AKRJ_G0006715
lincRNA gene Chr5:113153271-113182265 (+)
BALB/cJ MGP_BALBcJ_G0006721
lincRNA gene Chr5:111040439-111063897 (+)
C3H/HeJ MGP_C3HHeJ_G0006666
lincRNA gene Chr5:113577014-113601193 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006886
lincRNA gene Chr5:118570018-118602462 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006142
lincRNA gene Chr5:104509474-104532897 (+)
CAST/EiJ MGP_CASTEiJ_G0006589
lincRNA gene Chr5:112476120-112502563 (+)
CBA/J MGP_CBAJ_G0006648
lincRNA gene Chr5:123008276-123039866 (+)
DBA/2J MGP_DBA2J_G0006668
lincRNA gene Chr5:109748314-109772815 (+)
FVB/NJ MGP_FVBNJ_G0006692
lincRNA gene Chr5:108447470-108472329 (+)
LP/J MGP_LPJ_G0006752
lincRNA gene Chr5:114665395-114690663 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006676
lincRNA gene Chr5:127622207-127650557 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006888
lincRNA gene Chr5:112588662-112614858 (+)
PWK/PhJ MGP_PWKPhJ_G0006528
lincRNA gene Chr5:108339554-108363827 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006434
lincRNA gene Chr5:110059816-110083788 (+)
WSB/EiJ MGP_WSBEiJ_G0006640
lincRNA gene Chr5:113083328-113110088 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving C130026L21Rik
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
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Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 330164 NCBI Gene Model | MGI Sequence Detail 5593 C57BL/6J ±  kb
transcript NR_015546 RefSeq | MGI Sequence Detail 1838 C57BL/6  
polypeptide Q8C897 UniProt | EBI | MGI Sequence Detail 110 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 19
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/12/2021
MGI 6.16
The Jackson Laboratory