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C130026L21Rik Gene Detail
Summary
  • Symbol
    C130026L21Rik
  • Name
    RIKEN cDNA C130026L21 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3041189
    NCBI Gene: 330164
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr5:111581561-111587153 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 54.06 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3041189
lncRNA gene Chr5:111581422-111604932 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006751
lincRNA gene Chr5:114096449-114122952 (+)
A/J MGP_AJ_G0006745
lincRNA gene Chr5:109671650-109695227 (+)
AKR/J MGP_AKRJ_G0006715
lincRNA gene Chr5:113153271-113182265 (+)
BALB/cJ MGP_BALBcJ_G0006721
lincRNA gene Chr5:111040439-111063897 (+)
C3H/HeJ MGP_C3HHeJ_G0006666
lincRNA gene Chr5:113577014-113601193 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006886
lincRNA gene Chr5:118570018-118602462 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006142
lincRNA gene Chr5:104509474-104532897 (+)
CAST/EiJ MGP_CASTEiJ_G0006589
lincRNA gene Chr5:112476120-112502563 (+)
CBA/J MGP_CBAJ_G0006648
lincRNA gene Chr5:123008276-123039866 (+)
DBA/2J MGP_DBA2J_G0006668
lincRNA gene Chr5:109748314-109772815 (+)
FVB/NJ MGP_FVBNJ_G0006692
lincRNA gene Chr5:108447470-108472329 (+)
LP/J MGP_LPJ_G0006752
lincRNA gene Chr5:114665395-114690663 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006676
lincRNA gene Chr5:127622207-127650557 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006888
lincRNA gene Chr5:112588662-112614858 (+)
PWK/PhJ MGP_PWKPhJ_G0006528
lincRNA gene Chr5:108339554-108363827 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006434
lincRNA gene Chr5:110059816-110083788 (+)
WSB/EiJ MGP_WSBEiJ_G0006640
lincRNA gene Chr5:113083328-113110088 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving C130026L21Rik
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 330164 NCBI Gene Model | MGI Sequence Detail 5593 C57BL/6J ±  kb
transcript NR_015546 RefSeq | MGI Sequence Detail 1838 C57BL/6  
polypeptide Q8C897 UniProt | EBI | MGI Sequence Detail 110 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 19
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/11/2020
MGI 6.14
The Jackson Laboratory