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9930104L06Rik Gene Detail
Summary
  • Symbol
    9930104L06Rik
  • Name
    RIKEN cDNA 9930104L06 gene
Location &
Maps
more
  • Sequence Map
    Chr4:124937048-124944661 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 57.94 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3041172
unclassified non-coding RNA gene Chr4:124936987-124944661 (.)
129S1/SvImJ MGP_129S1SvImJ_G0015575
unclassified non-coding RNA gene Chr4:126504063-126513818 (+)
A/J MGP_AJ_G0015552
unclassified non-coding RNA gene Chr4:121536633-121544038 (+)
AKR/J MGP_AKRJ_G0015516
unclassified non-coding RNA gene Chr4:124861232-124883174 (+)
BALB/cJ MGP_BALBcJ_G0015514
unclassified non-coding RNA gene Chr4:122114016-122121917 (+)
C3H/HeJ MGP_C3HHeJ_G0015336
unclassified non-coding RNA gene Chr4:124946970-124955609 (+)
C57BL/6NJ MGP_C57BL6NJ_G0015967
unclassified non-coding RNA gene Chr4:131367961-131376858 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013702
unclassified non-coding RNA gene Chr4:114707141-114714225 (+)
CAST/EiJ MGP_CASTEiJ_G0014891
unclassified non-coding RNA gene Chr4:123017293-123024621 (+)
CBA/J MGP_CBAJ_G0015317
unclassified non-coding RNA gene Chr4:134650354-134657771 (+)
DBA/2J MGP_DBA2J_G0015410
unclassified non-coding RNA gene Chr4:122010013-122018159 (+)
FVB/NJ MGP_FVBNJ_G0015418
unclassified non-coding RNA gene Chr4:120637950-120648642 (+)
LP/J MGP_LPJ_G0015491
unclassified non-coding RNA gene Chr4:126796822-126804208 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015441
unclassified non-coding RNA gene Chr4:139621794-139632600 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016009
unclassified non-coding RNA gene Chr4:125225708-125233125 (+)
PWK/PhJ MGP_PWKPhJ_G0014676
unclassified non-coding RNA gene Chr4:118435171-118445223 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014464
unclassified non-coding RNA gene Chr4:120997645-121005069 (+)
WSB/EiJ MGP_WSBEiJ_G0014996
unclassified non-coding RNA gene Chr4:125301152-125310777 (+)



Homology
more
  • Human Ortholog
    C1orf109, chromosome 1 open reading frame 109
  • Vertebrate Orthologs
    10
  • Human Ortholog
    C1orf109, chromosome 1 open reading frame 109
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 54955
    neXtProt AC: NX_Q9NX04
    UniProt: Q9NX04

  • Chr Location
    1p34.3; chr1:37681570-37692336 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    12
  • Chemically induced (other)
    2
  • Gene trapped
    8
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving 9930104L06Rik
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000044730 Ensembl Gene Model | MGI Sequence Detail 7614 C57BL/6J ±  kb
transcript ENSMUST00000094769 Ensembl | MGI Sequence Detail 2911 Not Applicable  
polypeptide ENSMUSP00000154851 Ensembl | MGI Sequence Detail 217 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR029159 Casein Kinase 2 substrate
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 1
References
more
  • Summaries
    All 23
    Gene Ontology 1
    Phenotypes 9
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory