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BC064078 Pseudogene Detail
Summary
  • Symbol
    BC064078
  • Name
    cDNA sequence BC064078
Location &
Maps
more
  • Sequence Map
    Chr6:128992961-129006647 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 63.12 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    231 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3040692
pseudogene Chr6:128992952-129008040 (+)
129S1/SvImJ MGP_129S1SvImJ_G0039836
pseudogene Chr6:132649441-132664320 (+)
A/J MGP_AJ_G0039838
pseudogene Chr6:127571940-127586993 (+)
AKR/J MGP_AKRJ_G0039764
pseudogene Chr6:131034656-131049706 (+)
BALB/cJ MGP_BALBcJ_G0039810
pseudogene Chr6:127192548-127207591 (+)
C3H/HeJ MGP_C3HHeJ_G0039464
pseudogene Chr6:131230970-131247110 (+)
C57BL/6NJ MGP_C57BL6NJ_G0040380
pseudogene Chr6:136124908-136139987 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0038574
pseudogene Chr6:131440550-131455473 (+)
CBA/J MGP_CBAJ_G0039433
pseudogene Chr6:141466919-141481969 (+)
DBA/2J MGP_DBA2J_G0039633
pseudogene Chr6:126515121-126530175 (+)
FVB/NJ MGP_FVBNJ_G0039592
pseudogene Chr6:125410507-125426113 (+)
LP/J MGP_LPJ_G0039671
pseudogene Chr6:132835502-132850939 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0039591
pseudogene Chr6:145298933-145314176 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0040481
pseudogene Chr6:131106200-131121060 (+)
PWK/PhJ MGP_PWKPhJ_G0038251
pseudogene Chr6:124800741-124816203 (+)
SPRET/EiJ MGP_SPRETEiJ_G0037996
pseudogene Chr6:129127358-129143343 (+)
WSB/EiJ MGP_WSBEiJ_G0038807
pseudogene Chr6:131511355-131527579 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 408064 NCBI Gene Model | MGI Sequence Detail 13687 C57BL/6J ±  kb
transcript NR_015455 RefSeq | MGI Sequence Detail 917 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 13
    Phenotypes 2
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
06/11/2019
MGI 6.14
The Jackson Laboratory