About   Help   FAQ
Spag6 Gene Detail
Summary
  • Symbol
    Spag6
  • Name
    sperm associated antigen 6
  • Synonyms
    BC061194, Spag6l
  • Feature Type
    protein coding gene
  • IDs
    MGI:3040687
    NCBI Gene: 381350
  • Gene Overview
    MyGene.info: SPAG6
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:18694011-18749746 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 12.90 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    225 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3040687
protein coding gene Chr2:18694011-18750413 (+)
129S1/SvImJ MGP_129S1SvImJ_G0025377
protein coding gene Chr2:16410326-16470177 (+)
A/J MGP_AJ_G0025355
protein coding gene Chr2:15748526-15804224 (+)
AKR/J MGP_AKRJ_G0025323
protein coding gene Chr2:16266980-16324559 (+)
BALB/cJ MGP_BALBcJ_G0025350
protein coding gene Chr2:15770797-15827668 (+)
C3H/HeJ MGP_C3HHeJ_G0025110
protein coding gene Chr2:16194789-16254979 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025793
protein coding gene Chr2:16828064-16889743 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023208
protein coding gene Chr2:15136833-15193563 (+)
CAST/EiJ MGP_CASTEiJ_G0024574
protein coding gene Chr2:16163800-16220056 (+)
CBA/J MGP_CBAJ_G0025089
protein coding gene Chr2:17588590-17654223 (+)
DBA/2J MGP_DBA2J_G0025221
protein coding gene Chr2:15673201-15730211 (+)
FVB/NJ MGP_FVBNJ_G0025184
protein coding gene Chr2:15469272-15525317 (+)
LP/J MGP_LPJ_G0025308
protein coding gene Chr2:16245979-16305514 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025215
protein coding gene Chr2:17544243-17607420 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025851
protein coding gene Chr2:16220698-16280383 (+)
PWK/PhJ MGP_PWKPhJ_G0024323
protein coding gene Chr2:15549385-15605150 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024123
protein coding gene Chr2:16356316-16413404 (+)
WSB/EiJ MGP_WSBEiJ_G0024644
protein coding gene Chr2:16280838-16342586 (+)



Homology
more
  • Human Ortholog
    SPAG6, sperm associated antigen 6
  • Vertebrate Orthologs
    2
  • Human Ortholog
    SPAG6, sperm associated antigen 6
    Orthology source: HGNC
  • Synonyms
    CFAP194, CT141, FAP194, pf16, Repro-SA-1
  • Links
    NCBI Gene ID: 9576
    neXtProt AC: NX_O75602
    UniProt: O75602

  • Chr Location
    10p12.2; chr10:22345416-22417610 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 381350 NCBI Gene Model | MGI Sequence Detail 55736 C57BL/6J ±  kb
transcript NM_001001334 RefSeq | MGI Sequence Detail 1651 C57BL/6  
polypeptide NP_001001334 RefSeq | MGI Sequence Detail 509 C57BL/6  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 2
References
more
  • Summaries
    All 22
    Phenotypes 3
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:285722 Liu Y, et al., The sperm-associated antigen 6 interactome and its role in spermatogenesis. Reproduction. 2019 Aug;158(2):181-197

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/10/2020
MGI 6.16
The Jackson Laboratory