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Spag6 Gene Detail
Summary
  • Symbol
    Spag6
  • Name
    sperm associated antigen 6
  • Synonyms
    BC061194, Spag6l
  • Feature Type
    protein coding gene
  • IDs
    MGI:3040687
    NCBI Gene: 381350
  • Gene Overview
    MyGene.info: SPAG6
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:18694011-18749746 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 12.90 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    225 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3040687
protein coding gene Chr2:18694011-18750413 (+)
129S1/SvImJ MGP_129S1SvImJ_G0025377
protein coding gene Chr2:16410326-16470177 (+)
A/J MGP_AJ_G0025355
protein coding gene Chr2:15748526-15804224 (+)
AKR/J MGP_AKRJ_G0025323
protein coding gene Chr2:16266980-16324559 (+)
BALB/cJ MGP_BALBcJ_G0025350
protein coding gene Chr2:15770797-15827668 (+)
C3H/HeJ MGP_C3HHeJ_G0025110
protein coding gene Chr2:16194789-16254979 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025793
protein coding gene Chr2:16828064-16889743 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023208
protein coding gene Chr2:15136833-15193563 (+)
CAST/EiJ MGP_CASTEiJ_G0024574
protein coding gene Chr2:16163800-16220056 (+)
CBA/J MGP_CBAJ_G0025089
protein coding gene Chr2:17588590-17654223 (+)
DBA/2J MGP_DBA2J_G0025221
protein coding gene Chr2:15673201-15730211 (+)
FVB/NJ MGP_FVBNJ_G0025184
protein coding gene Chr2:15469272-15525317 (+)
LP/J MGP_LPJ_G0025308
protein coding gene Chr2:16245979-16305514 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025215
protein coding gene Chr2:17544243-17607420 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025851
protein coding gene Chr2:16220698-16280383 (+)
PWK/PhJ MGP_PWKPhJ_G0024323
protein coding gene Chr2:15549385-15605150 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024123
protein coding gene Chr2:16356316-16413404 (+)
WSB/EiJ MGP_WSBEiJ_G0024644
protein coding gene Chr2:16280838-16342586 (+)



Homology
more
  • Human Ortholog
    SPAG6, sperm associated antigen 6
  • Vertebrate Orthologs
    2
  • Human Ortholog
    SPAG6, sperm associated antigen 6
    Orthology source: HGNC
  • Synonyms
    CT141, pf16, Repro-SA-1
  • Links
    NCBI Gene ID: 9576
    neXtProt AC: NX_O75602
    UniProt: O75602

  • Chr Location
    10p12.2; chr10:22345416-22417610 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 381350 NCBI Gene Model | MGI Sequence Detail 55736 C57BL/6J ±  kb
transcript NM_001001334 RefSeq | MGI Sequence Detail 1651 C57BL/6  
polypeptide NP_001001334 RefSeq | MGI Sequence Detail 509 C57BL/6  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Phenotypes 2
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:272302 Cooley LF, et al., Impaired immunological synapse in sperm associated antigen 6 (SPAG6) deficient mice. Sci Rep. 2016 May 12;6:25840

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/04/2019
MGI 6.14
The Jackson Laboratory