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Rpl23a Gene Detail
Summary
  • Symbol
    Rpl23a
  • Name
    ribosomal protein L23A
  • Synonyms
    MDA20
  • Feature Type
    protein coding gene
  • IDs
    MGI:3040672
    NCBI Gene: 268449
  • Gene Overview
    MyGene.info: RPL23A
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:78180935-78183584 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 46.74 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    12 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3040672
protein coding gene Chr11:78180932-78183584 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018767
protein coding gene Chr11:79162562-79165214 (-)
A/J MGP_AJ_G0018733
protein coding gene Chr11:76139719-76142371 (-)
AKR/J MGP_AKRJ_G0018703
protein coding gene Chr11:78444830-78447482 (-)
BALB/cJ MGP_BALBcJ_G0018707
protein coding gene Chr11:76548937-76551589 (-)
C3H/HeJ MGP_C3HHeJ_G0018520
protein coding gene Chr11:78485915-78488567 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019158
protein coding gene Chr11:81634180-81636832 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016793
protein coding gene Chr11:73113707-73116387 (-)
CAST/EiJ MGP_CASTEiJ_G0018074
protein coding gene Chr11:78923045-78925703 (-)
CBA/J MGP_CBAJ_G0018490
protein coding gene Chr11:85196098-85198750 (-)
DBA/2J MGP_DBA2J_G0018599
protein coding gene Chr11:75721865-75724517 (-)
FVB/NJ MGP_FVBNJ_G0018589
protein coding gene Chr11:75309715-75312367 (-)
LP/J MGP_LPJ_G0018670
protein coding gene Chr11:79698302-79700954 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018615
protein coding gene Chr11:85618275-85620927 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019198
protein coding gene Chr11:78687674-78690326 (-)
PWK/PhJ MGP_PWKPhJ_G0017845
protein coding gene Chr11:76503561-76506831 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017636
protein coding gene Chr11:78295416-78299014 (-)
WSB/EiJ MGP_WSBEiJ_G0018127
protein coding gene Chr11:78501241-78503891 (-)



Homology
more
  • Human Ortholog
    RPL23A, ribosomal protein L23a
  • Vertebrate Orthologs
    6
  • Human Ortholog
    RPL23A, ribosomal protein L23a
    Orthology source: HGNC
  • Synonyms
    L23A, MDA20
  • Links
    NCBI Gene ID: 6147
    neXtProt AC: NX_P62750
    UniProt: P62750

  • Chr Location
    17q11.2; chr17:28719982-28724356 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 268449 NCBI Gene Model | MGI Sequence Detail 2650 C57BL/6J ±  kb
transcript NM_207523 RefSeq | MGI Sequence Detail 560 C57BL/6  
polypeptide P62751 UniProt | EBI | MGI Sequence Detail 156 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    4 Sequences
  • InterPro Domains
    IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
    IPR019985 Ribosomal protein L23
    IPR012678 Ribosomal protein L23/L15e core domain superfamily
    IPR001014 Ribosomal protein L23/L25, conserved site
    IPR005633 Ribosomal protein L23/L25, N-terminal
    IPR013025 Ribosomal protein L25/L23
Molecular
Reagents
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  • All nucleic 8
    cDNA 8

    Microarray probesets 13
References
more
  • Summaries
    All 35
    Developmental Gene Expression 1
    Gene Ontology 6
    Phenotypes 12
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory