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Rsad1
Gene Detail
Symbol

Name
ID
Rsad1
radical S-adenosyl methionine domain containing 1
MGI:3039628
Feature Type
protein coding gene
Genetic Map
Chromosome 11
58.90 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr11:94539798-94549255 bp, - strand
From VEGA annotation of GRCm38

  9458 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:41252  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: RSAD1
Gene Tree: Rsad1

Human
homologs
RSAD1, radical S-adenosyl methionine domain containing 1
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 55316
neXtProt AC: NX_Q9HA92

Human Chr (Location): 17q21.33; chr17:50478800-50502164 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(10) : Targeted(10)
Genomic Mutations involving Rsad1 (3)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Mutations Annotated to Human Diseases (1)   
Interactions
Rsad1 interacts with 300 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
Expression
cDNA source data(15)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase rsad1    NEW 
Molecular
reagents
All nucleic(15) cDNA(15)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000002016 (Evidence)
Ensembl Gene Model ENSMUSG00000039096 (Evidence)
Entrez Gene 237926 (Evidence)
UniGene 342275
DFCI TC1598810, TC1645707, TC1723812
DoTS DT.97393874, DT.94277228, DT.94223287
NIA Mouse Gene Index U033283
EC 1.3.99.-
Consensus CDS Project CCDS25258.1
International Mouse Phenotyping Consortium Status Rsad1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000002016 VEGA Gene Model | MGI Sequence Detail 9458 C57BL/6J ±  kb
transcript OTTMUST00000004065 VEGA | MGI Sequence Detail 4143 Not Applicable 
polypeptide OTTMUSP00000001955 VEGA | MGI Sequence Detail 442 Not Applicable 

For the selected sequences
All sequences(45) RefSeq(14) UniProt(1)
Polymorphisms
SNPs within 2kb(130 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related
InterPro IPR006638 Elongator protein 3/MiaB/NifB
InterPro IPR010723 HemN, C-terminal domain
InterPro IPR007197 Radical SAM
InterPro IPR023404 Radical SAM, alpha/beta horseshoe
Protein Ontology PR:000014317 radical S-adenosyl methionine domain-containing protein 1, mitochondrial
References
(Earliest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(31)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
06/30/2015
MGI 5.22
The Jackson Laboratory