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BC051226 Gene Detail
Summary
  • Symbol
    BC051226
  • Name
    cDNA sequence BC051226
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3039585
    NCBI Gene: 407803
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:33908182-33909178 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 17.98 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3039585
lncRNA gene Chr17:33908044-33909317 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003391
antisense lncRNA gene Chr17:33857594-33858729 (-)
A/J MGP_AJ_G0003368
antisense lncRNA gene Chr17:32690740-32691875 (-)
AKR/J MGP_AKRJ_G0003351
antisense lncRNA gene Chr17:33086388-33087523 (-)
BALB/cJ MGP_BALBcJ_G0003357
antisense lncRNA gene Chr17:32863679-32864814 (-)
C3H/HeJ MGP_C3HHeJ_G0003309
antisense lncRNA gene Chr17:33441824-33442959 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003486
antisense lncRNA gene Chr17:27189431-27190566 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003013
antisense lncRNA gene Chr17:30193106-30194235 (-)
CAST/EiJ MGP_CASTEiJ_G0003272
antisense lncRNA gene Chr17:33512233-33513368 (-)
CBA/J MGP_CBAJ_G0003305
antisense lncRNA gene Chr17:36539715-36540850 (-)
DBA/2J MGP_DBA2J_G0003312
antisense lncRNA gene Chr17:32068162-32069297 (-)
FVB/NJ MGP_FVBNJ_G0003330
antisense lncRNA gene Chr17:31927584-31928719 (-)
LP/J MGP_LPJ_G0003385
antisense lncRNA gene Chr17:34131963-34133098 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003318
antisense lncRNA gene Chr17:35592233-35593368 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003500
antisense lncRNA gene Chr17:33410318-33411463 (-)
PWK/PhJ MGP_PWKPhJ_G0003231
antisense lncRNA gene Chr17:30980968-30982103 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003175
antisense lncRNA gene Chr17:31369661-31370799 (-)
WSB/EiJ MGP_WSBEiJ_G0003306
antisense lncRNA gene Chr17:33452520-33453655 (-)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    4 phenotype references
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 407803 NCBI Gene Model | MGI Sequence Detail 997 C57BL/6J ±  kb
transcript NR_045146 RefSeq | MGI Sequence Detail 843 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 1
References
more
  • Summaries
    All 14
    Phenotypes 4
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory