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Ecm2 Gene Detail
Summary
  • Symbol
    Ecm2
  • Name
    extracellular matrix protein 2, female organ and adipocyte specific
  • Synonyms
    9030618O22Rik, tenonectin
  • Feature Type
    protein coding gene
  • IDs
    MGI:3039578
    NCBI Gene: 407800
  • Gene Overview
    MyGene.info: ECM2
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:49504810-49532789 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 25.29 cM, cytoband B1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    47 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3039578
protein coding gene Chr13:49504810-49532789 (.)
129S1/SvImJ MGP_129S1SvImJ_G0020537
protein coding gene Chr13:48483313-48510181 (+)
A/J MGP_AJ_G0020491
protein coding gene Chr13:46758508-46784621 (+)
AKR/J MGP_AKRJ_G0020468
protein coding gene Chr13:48083484-48110632 (+)
BALB/cJ MGP_BALBcJ_G0020487
protein coding gene Chr13:46978172-47004321 (+)
C3H/HeJ MGP_C3HHeJ_G0020286
protein coding gene Chr13:47905351-47932111 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020920
protein coding gene Chr13:49941602-49968892 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018505
protein coding gene Chr13:44732790-44763185 (+)
CAST/EiJ MGP_CASTEiJ_G0019801
protein coding gene Chr13:47918577-47945248 (+)
CBA/J MGP_CBAJ_G0020247
protein coding gene Chr13:52011524-52042314 (+)
DBA/2J MGP_DBA2J_G0020369
protein coding gene Chr13:46287197-46315938 (+)
FVB/NJ MGP_FVBNJ_G0020348
protein coding gene Chr13:45810854-45837017 (+)
LP/J MGP_LPJ_G0020444
protein coding gene Chr13:48704654-48731764 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020377
protein coding gene Chr13:51709035-51738324 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020963
protein coding gene Chr13:47774250-47807959 (+)
PWK/PhJ MGP_PWKPhJ_G0019557
protein coding gene Chr13:46473987-46501731 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019385
protein coding gene Chr13:46482639-46510804 (+)
WSB/EiJ MGP_WSBEiJ_G0019863
protein coding gene Chr13:48101318-48130945 (+)



Homology
more
  • Human Ortholog
    ECM2, extracellular matrix protein 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ECM2, extracellular matrix protein 2
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 1842
    neXtProt AC: NX_O94769
    UniProt: O94769

  • Chr Location
    9q22.31; chr9:92493547-92536092 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 407800 NCBI Gene Model | MGI Sequence Detail 27980 C57BL/6J ±  kb
transcript NM_001012324 RefSeq | MGI Sequence Detail 3596 C57BL/6  
polypeptide Q5FW85 UniProt | EBI | MGI Sequence Detail 670 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 28
    cDNA 28

    Microarray probesets 2
Other
Accession IDs
less
MGI:1918796
References
more
  • Summaries
    All 32
    Developmental Gene Expression 2
    Gene Ontology 4
    Phenotypes 8
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory