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BC048644 Gene Detail
Summary
  • Symbol
    BC048644
  • Name
    cDNA sequence BC048644
Location &
Maps
more
  • Sequence Map
    Chr8:121907833-121918428 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 70.81 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    264 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3039566
lncRNA gene Chr8:121907833-121919690 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004595
antisense lncRNA gene Chr8:125427880-125440415 (+)
A/J MGP_AJ_G0004575
antisense lncRNA gene Chr8:120224213-120234267 (+)
AKR/J MGP_AKRJ_G0004559
antisense lncRNA gene Chr8:123751387-123761433 (+)
BALB/cJ MGP_BALBcJ_G0004560
antisense lncRNA gene Chr8:120430157-120440212 (+)
C3H/HeJ MGP_C3HHeJ_G0004509
antisense lncRNA gene Chr8:124443258-124453312 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004709
antisense lncRNA gene Chr8:129610847-129621243 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004160
antisense lncRNA gene Chr8:113058993-113061014 (+)
CAST/EiJ MGP_CASTEiJ_G0004467
antisense lncRNA gene Chr8:124495755-124509174 (+)
CBA/J MGP_CBAJ_G0004503
antisense lncRNA gene Chr8:134391139-134393130 (+)
DBA/2J MGP_DBA2J_G0004518
antisense lncRNA gene Chr8:119422023-119432390 (+)
FVB/NJ MGP_FVBNJ_G0004535
antisense lncRNA gene Chr8:118531805-118543566 (+)
LP/J MGP_LPJ_G0004599
antisense lncRNA gene Chr8:125552741-125563131 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004524
antisense lncRNA gene Chr8:136591405-136603613 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004709
antisense lncRNA gene Chr8:123919982-123930856 (+)
PWK/PhJ MGP_PWKPhJ_G0004420
antisense lncRNA gene Chr8:119226743-119237604 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004361
antisense lncRNA gene Chr8:122629701-122640225 (+)
WSB/EiJ MGP_WSBEiJ_G0004508
antisense lncRNA gene Chr8:124671603-124683409 (+)



Homology
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Expression
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  • cDNA Data
Interactions
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Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 407789 NCBI Gene Model | MGI Sequence Detail 10596 C57BL/6J ±  kb
transcript NM_001033485 RefSeq | MGI Sequence Detail 2260 C57BL/6  
polypeptide NP_001028657 RefSeq | MGI Sequence Detail 230 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR016133 Insect cysteine-rich antifreeze protein
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5
References
more
  • Summaries
    All 9
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/05/2019
MGI 6.14
The Jackson Laboratory